Pairwise Alignments

Query, 407 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase MnmA from Caulobacter crescentus NA1000

Subject, 373 a.a., tRNA 2-thiouridine(34) synthase MnmA from Magnetospirillum magneticum AMB-1

 Score =  369 bits (947), Expect = e-107
 Identities = 199/371 (53%), Positives = 243/371 (65%), Gaps = 20/371 (5%)

Query: 32  PEGARIVAAMSGGVDSTVTAALLARAGYDVVGVTLQLYDHGAAISRKGAC-----CAGQD 86
           P   R+V AMSGGVDS+  AALL   GYDVVGVTLQLYD   +    GAC     CAG+D
Sbjct: 10  PSSTRVVVAMSGGVDSSAVAALLKEQGYDVVGVTLQLYDLATSGIEPGACRPNTCCAGKD 69

Query: 87  ILDARMAAERIGIPHYVLDYESRFREQVIEDFADAYLRGETPIPCVRCNQTVKFRDLLDV 146
           I DAR  A+ +GIPHYVLD+E  FR  V+E FA  YL   TP+PC+ CN+TVKFRDLL V
Sbjct: 70  IHDARAVADALGIPHYVLDFEETFRRDVVERFAQTYLEARTPVPCIECNRTVKFRDLLGV 129

Query: 147 ARDLGAEAMATGHYVQRAMPGNGGNRPELRRAADPAKDQSYFLFATTREQLDFLRFPLGG 206
           A+DLG +A+ATGHYV+R  PG  G  PEL    DP +DQSYFLFATTR+QLDFLRFPLG 
Sbjct: 130 AKDLGGDALATGHYVRR-RPGVDG--PELWTGRDPGRDQSYFLFATTRDQLDFLRFPLGD 186

Query: 207 M-DKPTVRAVAAGLGLSIADKPDSQDICFVPEGKYTTVIDRIRPQGAEAGDVVHLDGRVL 265
           M  K   RA+AA   L +A K DSQDICFVP+G Y  ++ R+ P  A  G++V   G+VL
Sbjct: 187 MAGKEETRAIAARHHLPVAAKRDSQDICFVPDGDYAALVTRLHPDAARPGEIVDTAGKVL 246

Query: 266 GRHEGVTRYTIGQRRGLNIAVGDPLFVVKINADKRQVIVGPREALLTASLTLKEGSWLGA 325
           GRH G+  YTIGQRRGL +  G PL+VV +  +  +V+VG RE L   ++ ++  +WLG 
Sbjct: 247 GRHGGLIHYTIGQRRGLGLGGGPPLYVVALEPETGRVVVGSREDLNCLTIQVEAVNWLGG 306

Query: 326 QDSLEAAAEDGQRVLARVRSTREPVPGRLAMIDG-ALSVVFDGAEEGVAPGQACVLYDPA 384
                   E   RV  +VRSTR   P  L  + G    V+ D  E+GVAPGQACV Y   
Sbjct: 307 D-------ETELRVAVKVRSTRPAAPALLRRLSGDRAQVILDHPEQGVAPGQACVFY--- 356

Query: 385 DPDRVLGGGFI 395
             +RVLGGG+I
Sbjct: 357 QGERVLGGGWI 367