Pairwise Alignments

Query, 407 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase MnmA from Caulobacter crescentus NA1000

Subject, 368 a.a., tRNA-specific 2-thiouridylase MnmA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  200 bits (508), Expect = 6e-56
 Identities = 127/370 (34%), Positives = 199/370 (53%), Gaps = 26/370 (7%)

Query: 36  RIVAAMSGGVDSTVTAALLARAGYDVVGVTLQLYDHGAAISRKGACCAGQDILDARMAAE 95
           +++  MSGGVDS+V+A LL + GY V G+ ++ ++       +  C A  D+ DA+   +
Sbjct: 7   KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDG---EEYCTAAADLADAQAVCD 63

Query: 96  RIGIPHYVLDYESRFREQVIEDFADAYLRGETPIPCVRCNQTVKFRDLLD-VARDLGAEA 154
           ++GI  + +++ + + + V E F + Y  G TP P + CN+ +KF+  L+  A DLGA+ 
Sbjct: 64  KLGIELHTVNFAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123

Query: 155 MATGHYVQRAMPGNGGNRPELRRAADPAKDQSYFLFATTREQLDFLRFPLGGMDKPTVRA 214
           +ATGHYV+RA   NG +R  L R  D  KDQSYFL+    EQ+    FP+G ++KP VR 
Sbjct: 124 IATGHYVRRA-DVNGKSR--LLRGLDGNKDQSYFLYTLGHEQIAQSLFPVGELEKPQVRK 180

Query: 215 VAAGLGLSIADKPDSQDICFVPEGKYTTVIDRIRPQGAEAGDVVHLDGRVLGRHEGVTRY 274
           +A  LGL  A K DS  ICF+ E K+   + R  P  A+ G ++ +DG  +G H+G+  +
Sbjct: 181 IAEDLGLVTAKKKDSTGICFIGERKFRDFLGRYLP--AQPGKIITVDGDEIGEHQGLMYH 238

Query: 275 TIGQRRGLNI-----AVGDPLFVVKINADKRQVIVG---PREALLTASLTLKEGSWLGAQ 326
           T+GQR+GL I        DP +VV  + +   +IV        L++  L  ++  W+  +
Sbjct: 239 TLGQRKGLGIGGTKDGSEDPWYVVDKDVENNVLIVAQGHEHPRLMSVGLIAQQLHWVDRE 298

Query: 327 DSLEAAAEDGQRVLARVRSTREPVPGRL-AMIDGALSVVFDGAEEGVAPGQACVLYDPAD 385
                      R   + R  +  +P  + A+ D  + V+FD     V PGQ+ V Y    
Sbjct: 299 PFTGTL-----RCTVKTRYRQTDIPCTINALNDDRIEVIFDEPVAAVTPGQSAVFY---S 350

Query: 386 PDRVLGGGFI 395
            +  LGGG I
Sbjct: 351 GEVCLGGGII 360