Pairwise Alignments

Query, 407 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase MnmA from Caulobacter crescentus NA1000

Subject, 380 a.a., tRNA-specific 2-thiouridylase MnmA from Agrobacterium fabrum C58

 Score =  427 bits (1099), Expect = e-124
 Identities = 219/370 (59%), Positives = 271/370 (73%), Gaps = 4/370 (1%)

Query: 41  MSGGVDSTVTAALLARAGYDVVGVTLQLYDHGAAISRKGACCAGQDILDARMAAERIGIP 100
           MSGGVDS+V A +L R GYDV+G+TLQLYDHGAA+ R G+CCAGQDI DAR   E +GIP
Sbjct: 1   MSGGVDSSVVAGILKREGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCETLGIP 60

Query: 101 HYVLDYESRFREQVIEDFADAYLRGETPIPCVRCNQTVKFRDLLDVARDLGAEAMATGHY 160
           HYVLDYE+RFRE VI  FA+AY  GETPIPCV CNQTVKF DLL  A++LGA+A+ATGHY
Sbjct: 61  HYVLDYEARFRETVINPFAEAYAMGETPIPCVACNQTVKFADLLATAQELGADALATGHY 120

Query: 161 VQ-RAMPGNGG-NRPELRRAADPAKDQSYFLFATTREQLDFLRFPLGGMDKPTVRAVAAG 218
           ++ R  P +G   R  L R  D  +DQS+FLFATT+EQ+D+LRFPLGG+ K   RA+A  
Sbjct: 121 IRSRPNPVSGQPGRRALYRPIDSDRDQSWFLFATTQEQIDYLRFPLGGLSKAETRALAEE 180

Query: 219 LGLSIADKPDSQDICFVPEGKYTTVIDRIRPQGAEAGDVVHLDGRVLGRHEGVTRYTIGQ 278
           +GL +A K DSQDICFVP+GKYT +I++++P  A AGD+VHLDGRVLGRH+G+  YTIGQ
Sbjct: 181 MGLVVAKKADSQDICFVPQGKYTDIINKLKPNAALAGDIVHLDGRVLGRHDGIVHYTIGQ 240

Query: 279 RRGLNIAVGDPLFVVKINADKRQVIVGPREALLTASLTLKEGSWLGAQDSLEAAAEDGQR 338
           RRG+ +A G+PL+VV ++A  R+VIVGPREAL T  + L++ +WLG   +L A A  G  
Sbjct: 241 RRGIGVATGEPLYVVHLDARGRRVIVGPREALETRRVYLRDMNWLG-DGALAADAGQGFT 299

Query: 339 VLARVRSTREPVPGRLAMIDGALSVVFDGAEEGVAPGQACVLYDPADPD-RVLGGGFIAG 397
             A+VRSTR P    L   +  + V     E GVAPGQACVLY    PD RV GGGFI  
Sbjct: 300 CFAKVRSTRPPTEAVLHADENGIYVDLMTGEAGVAPGQACVLYSAPGPDARVYGGGFIDR 359

Query: 398 TTRQMDLNAA 407
           + R +D  A+
Sbjct: 360 SERSVDAEAS 369