Pairwise Alignments

Query, 515 a.a., inositol transport ATP-binding protein IatA from Caulobacter crescentus NA1000

Subject, 514 a.a., L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2) from Pseudomonas fluorescens GW456-L13

 Score =  386 bits (991), Expect = e-111
 Identities = 219/488 (44%), Positives = 312/488 (63%), Gaps = 9/488 (1%)

Query: 9   VSKSFPGVRALDQVDLVVGVGEVHALLGENGAGKSTLIKILSAAHAADAGTVTFAGQVLD 68
           + K+FPGV+ALD +  V   G+VHAL+GENGAGKSTL+KIL  A+   +G +    + +D
Sbjct: 21  IGKTFPGVKALDNISFVAHPGQVHALMGENGAGKSTLLKILGGAYTPCSGALQIGERTMD 80

Query: 69  PRDAPLRRQQLGIATIYQEFNLFPELSVAENMYLGREPRRLGLVDWSRLRADAQALLNDL 128
            +         G+A I+QE +L PE++VAEN++LG  P   GL++ S LR  A A L  L
Sbjct: 81  FKSTADSIGS-GVAVIHQELHLVPEMTVAENLFLGHLPASFGLINRSTLRQQALACLKGL 139

Query: 129 GLPLNPDAPVRGLTVAEQQMVEIAKAMTLNARLIIMDEPTAALSGREVDRLHAIIAGLKA 188
              ++P   V  L++ ++Q+VEIAKA++  A +I  DEPT++LS RE+DRL AII  L+ 
Sbjct: 140 ADEIDPQEKVGRLSLGQRQLVEIAKALSRGAHVIAFDEPTSSLSAREIDRLMAIIGRLRD 199

Query: 189 RSVSVIYVSHRLGEVKAMCDRYTVMRDGRFVAS-GDVADVEVADMVRLMVGRHVEFERRK 247
               V+YVSHR+ EV  +C+  TV +DGR+V +  D++ +    +V  MVGR ++     
Sbjct: 200 EGKVVLYVSHRMEEVFRICNAVTVFKDGRYVRTFDDMSQLTHDQLVTCMVGRDIQDIYDY 259

Query: 248 RRRPPGAVVLKVEGVTPAAPRLSAPGYLRQVSFAARGGEIVGLAGLVGAGRTDLARLIFG 307
           R R  GAV LKV+G       L  PG    VSF    GEI+GL GLVGAGRT+L RL+ G
Sbjct: 260 RPRQRGAVALKVDG-------LLGPGLREPVSFEVHKGEILGLFGLVGAGRTELLRLLSG 312

Query: 308 ADPIAAGRVLVDDKPLRLRSPRDAIQAGIMLVPEDRKQQGCFLDHSIRRNLSLPSLKALS 367
               +AG++ +    L+LRSPRDAI AGI+L PEDRK++G     S+  N+++ +  A S
Sbjct: 313 LARHSAGQLKLRGHELKLRSPRDAIAAGILLCPEDRKKEGILPLASVAENINISARGAHS 372

Query: 368 ALGQWVDERAERDLVETYRQKLRIKMADAETAIGKLSGGNQQKVLLGRAMALTPKVLIVD 427
             G  +    E+D  E   + L++K  +A   I  LSGGNQQK +LGR +++  KVL++D
Sbjct: 373 TFGCLLRGLWEKDNAEQQIKALKVKTPNAAQKIMYLSGGNQQKAILGRWLSMPMKVLLLD 432

Query: 428 EPTRGIDIGAKAEVHQVLSDLADLGVAVVVISSELAEVMAVSDRIVVFREGVIVADLDAQ 487
           EPTRGIDIGAKAE++Q++ +LA  G+AV+V+SS+L EVM +SDRI+V  EG +  +L  +
Sbjct: 433 EPTRGIDIGAKAEIYQIIHNLAAEGIAVIVVSSDLMEVMGISDRILVLCEGALRGELSRE 492

Query: 488 TATEEGLM 495
            A E  L+
Sbjct: 493 QANESNLL 500



 Score = 77.4 bits (189), Expect = 1e-18
 Identities = 63/258 (24%), Positives = 110/258 (42%), Gaps = 32/258 (12%)

Query: 257 LKVEGVTPAAPRLSAPGYLRQVSFAARGGEIVGLAGLVGAGRTDLARLIFGADPIAAGRV 316
           L+  G+    P + A   L  +SF A  G++  L G  GAG++ L +++ GA    +G +
Sbjct: 16  LRFNGIGKTFPGVKA---LDNISFVAHPGQVHALMGENGAGKSTLLKILGGAYTPCSGAL 72

Query: 317 LVDDKPLRLRSPRDAIQAGIM-------LVPEDRKQQGCFLDHSIRR----NLSLPSLKA 365
            + ++ +  +S  D+I +G+        LVPE    +  FL H        N S    +A
Sbjct: 73  QIGERTMDFKSTADSIGSGVAVIHQELHLVPEMTVAENLFLGHLPASFGLINRSTLRQQA 132

Query: 366 LSALGQWVDERAERDLVETYRQKLRIKMADAETAIGKLSGGNQQKVLLGRAMALTPKVLI 425
           L+ L    DE                   D +  +G+LS G +Q V + +A++    V+ 
Sbjct: 133 LACLKGLADE------------------IDPQEKVGRLSLGQRQLVEIAKALSRGAHVIA 174

Query: 426 VDEPTRGIDIGAKAEVHQVLSDLADLGVAVVVISSELAEVMAVSDRIVVFREGVIVADLD 485
            DEPT  +       +  ++  L D G  V+ +S  + EV  + + + VF++G  V   D
Sbjct: 175 FDEPTSSLSAREIDRLMAIIGRLRDEGKVVLYVSHRMEEVFRICNAVTVFKDGRYVRTFD 234

Query: 486 AQTATEEGLMAYMATGTD 503
             +      +     G D
Sbjct: 235 DMSQLTHDQLVTCMVGRD 252