Pairwise Alignments

Query, 326 a.a., inositol ABC transporter, periplasmic inositol-binding protein IbpA from Caulobacter crescentus NA1000

Subject, 296 a.a., Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  160 bits (404), Expect = 5e-44
 Identities = 101/308 (32%), Positives = 169/308 (54%), Gaps = 17/308 (5%)

Query: 6   MSRRRLLGLAAGLGLGTAALGLMTGCARGGAEAEVVVSFNDLSQPFFVAMRRELEDEAAK 65
           M+ ++L  L + + L        T  A   A+  + +  + L+ PFFV+++   + EA K
Sbjct: 1   MNMKKLATLVSAVALSA------TVSANAMAKDTIALVISTLNNPFFVSLKDGAQKEADK 54

Query: 66  LGVKVQVLDAQNNSSKQISDLQAAAVQGAKVVIVAPTDSKALAGAADDLVEQGVAVISVD 125
           LG  + VLD+QNN +K+++++Q   V+G K++++ PTDS A+  A     +  + VI++D
Sbjct: 55  LGYNLVVLDSQNNPAKELANVQDLTVRGTKILLINPTDSDAVGNAVKMANQAKIPVITLD 114

Query: 126 RNIAGGKTAVPHVGADNVAGGRAMADWVVKTYPAGARVVVITNDPGSSSSIERVKGVHDG 185
           R    G   V H+ +DNV GG+   D++ K    GA+V+ +    G+S++ ER +G    
Sbjct: 115 RQATKG-DVVSHIASDNVLGGKIAGDYIAKKAGEGAKVIELQGIAGTSAARERGEGFQQA 173

Query: 186 LAAGGPAFKIVTEQTANSKRDQALTVTQNILTSMRDTPPDVILCLNDDMAMGALEAVRAA 245
           +AA    F ++  Q A+  R + L V QN+LT+  D     +   ND+MA+GAL A++ A
Sbjct: 174 VAA--HKFNVLASQPADFDRTKGLNVMQNLLTAHPDV--QAVFAQNDEMALGALRALQTA 229

Query: 246 GLDSAKVKVIGFDAIPEALARIKAGEMVATVEQNPGLQIRTALRQAVDKIKSGAALKS-- 303
           G   A V V+GFD  P+    +K G++ AT+ Q P  QI     +  DK+  G  +++  
Sbjct: 230 G--KADVMVVGFDGTPDGEKAVKDGKLAATIAQLPD-QIGAKGVEVADKVLKGEKVQAKY 286

Query: 304 -VSLKPVL 310
            V LK V+
Sbjct: 287 PVDLKLVI 294