Pairwise Alignments

Query, 356 a.a., bacterial peptide chain Release factor 1 (RF-1) from Caulobacter crescentus NA1000

Subject, 354 a.a., peptide chain release factor 1 from Magnetospirillum magneticum AMB-1

 Score =  414 bits (1063), Expect = e-120
 Identities = 207/351 (58%), Positives = 267/351 (76%), Gaps = 3/351 (0%)

Query: 5   QARLDQVLDRFREVEARM--GAATDGAEIVKLSKEHAELRPVAEAVERLAKLSAERAELD 62
           + + D+VL R  EV A++  G   D   I +LSKE +EL PV  AV+   K   +  +  
Sbjct: 4   ETQFDKVLYRHDEVRAQLSSGEGMDSQTIQRLSKELSELDPVVTAVQAFRKAREDMVQAA 63

Query: 63  VMASDPEMAEMVRDEIQALDEKLPVMERELALMLAPKDKDENASAILEVRAGTGGDEAAL 122
            M +DP+M ++  +E  AL E+LP +ERE+ +ML PKD+ +  +AI+EVRAGTGG+EAAL
Sbjct: 64  EMMNDPDMKDLAEEEFYALKERLPALEREVQIMLLPKDEADEKNAIIEVRAGTGGEEAAL 123

Query: 123 FAGDLFRMYQRYAQTQGWRVEIDSISEGEMGGFKEIVASITGDGVFGRLKFESGVHRVQR 182
           FA +LFRMY+RYA   GWR E+  +++  +GG KE  A+ITG  VF RLKFESGVHRVQR
Sbjct: 124 FAAELFRMYERYAGLHGWRFEVMDVNDTGIGGVKEASATITGRNVFARLKFESGVHRVQR 183

Query: 183 VPATEAQGRIHTSAATVAVLPEAEDVEIEIKESDLRIDTYRSSGAGGQHVNKTDSAVRIT 242
           VPATE+QGRIHTSAATVA++PEAE+V+I++ +SDLR D YRS G+GGQ VN TDSAVR+T
Sbjct: 184 VPATESQGRIHTSAATVAIMPEAEEVDIQLNDSDLRFDVYRSQGSGGQSVNTTDSAVRVT 243

Query: 243 HLPTGVVVT-SSEKSQHQNRARAMKNLKARLYDMQREALDSARSEARKSQVGSGDRSERI 301
           H+PTG+ V    EKSQH+N+A A+K L+ARLY+ +R A D+ R+ ARKSQVGSGDRSERI
Sbjct: 244 HIPTGLAVACQQEKSQHKNKATALKLLRARLYERERSAKDAERAAARKSQVGSGDRSERI 303

Query: 302 RTYNFPQGRVTDHRINLTLYNLARIMEGDALDDVINPLIAEDQAERLASLE 352
           RTYNFPQGRVTDHRIN+TLY +  +M GDALD+++  L+A DQAERLA +E
Sbjct: 304 RTYNFPQGRVTDHRINMTLYKIDAVMSGDALDELVEALVAADQAERLAEME 354