Pairwise Alignments

Query, 478 a.a., D-xylose transporter (from data) from Caulobacter crescentus NA1000

Subject, 472 a.a., arabinose-proton symporter AraE from Escherichia coli ECRC101

 Score =  194 bits (494), Expect = 4e-54
 Identities = 138/468 (29%), Positives = 235/468 (50%), Gaps = 32/468 (6%)

Query: 16  DGGKVNMTFVAAIVAVATIGGFMFGYDSGVINGTQEGLESAFNLSKLGTGLNVGAILIGC 75
           D  ++NM FV+   AVA   G +FG D GVI G    +   F L+       V ++++G 
Sbjct: 17  DTRRMNM-FVSVAAAVA---GLLFGLDIGVIAGALPFITDHFVLTSRLQEWVVSSMMLGA 72

Query: 76  AIGAFAAGRLADVWGRRTVMIISALLFVISAIGTGAAESSIVFIIFRLIGGLGVGAASVL 135
           AIGA   G L+   GR+  ++  A+LFV+S+IG+  A S  + I  R++ G+ VG AS  
Sbjct: 73  AIGALFNGWLSFRLGRKYSLMAGAILFVLSSIGSAFATSVEMLIAARVVLGIAVGIASYT 132

Query: 136 CPVYISEVTPANIRGRLSSVQQIMIITGLTGAFVANYALAHTAGSSTAEFWLGLPAWRWM 195
            P+Y+SE+   N+RG++ S+ Q+M+  G+  AF+++ A +++              WR M
Sbjct: 133 APLYLSEMASENVRGKMISMYQLMVTLGIVLAFLSDTAFSYSGN------------WRAM 180

Query: 196 FWMQIIPAGVFFLCLLGIPESPRYLVAKGKDAQAEAILSRLFGAGQGAK-KVEEIRASLS 254
             +  +PA +  + ++ +P SPR+L  KG+  +AE +L  L    + A+ ++ EIR SL 
Sbjct: 181 LGVLALPAVLLIILVVFLPNSPRWLAEKGRHIEAEEVLRMLRDTSEKAREELNEIRESLK 240

Query: 255 ADHKPTFSDLLDPTTKKLRVILWAGLVLAVFQQLVGINIVFYYGSVLWQSVGFTEDDSLK 314
                     L    + +R  ++ G++L   QQ  G+NI+ YY   +++  GFT  +   
Sbjct: 241 LKQG---GWALFKINRNVRRAVFLGMLLQAMQQFTGMNIIMYYAPRIFKMAGFTTTEQQM 297

Query: 315 I-NILSGTLSILACLLAIGLIDKIGRKPLLLIGSAGMAVTLGVLTWC---FSTATTVNGA 370
           I  ++ G   + A  +A+  +DK GRKP L IG + MA+   VL +C   F   T  +G 
Sbjct: 298 IATLVVGLTFMFATFIAVFTVDKAGRKPALKIGFSVMALGTLVLGYCLMQFDNGTASSGL 357

Query: 371 LTLGDQIGLTALIAANLYVIFFNLSWGPVMWVMLGEMFPNQMRGSALAVCGFAQWIANFA 430
             L   +G+T +  A      + +S  PV+W++  E+ P + R   +       W++N  
Sbjct: 358 SWL--SVGMTMMCIAG-----YAMSAAPVVWILCSEIQPLKCRDFGITCSTTTNWVSNMI 410

Query: 431 ISVSF-PALAAASLPMTYGFYALSAVVSFFLVQKLVHETRGKELEAMQ 477
           I  +F   L +     T+  Y    +    +   L+ ET+   LE ++
Sbjct: 411 IGATFLTLLDSIGAAGTFWLYTALNIAFVGITFWLIPETKNVTLEHIE 458