Pairwise Alignments

Query, 478 a.a., D-xylose transporter (from data) from Caulobacter crescentus NA1000

Subject, 491 a.a., D-xylose transporter from Escherichia coli BL21

 Score =  306 bits (785), Expect = 8e-88
 Identities = 182/490 (37%), Positives = 274/490 (55%), Gaps = 53/490 (10%)

Query: 21  NMTFVAAIVAVATIGGFMFGYDSGVINGTQEGLESAF----NLSKLGT----GLNVGAIL 72
           N +++ +I  VAT+GG +FGYD+ VI+GT E L + F    NLS+       G  V + L
Sbjct: 6   NSSYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASAL 65

Query: 73  IGCAIGAFAAGRLADVWGRRTVMIISALLFVISAIGTGAAESSIV--------------- 117
           IGC IG    G  ++ +GRR  + I+A+LF IS +G+   E                   
Sbjct: 66  IGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGY 125

Query: 118 ---FIIFRLIGGLGVGAASVLCPVYISEVTPANIRGRLSSVQQIMIITGLTGAFVANYAL 174
              F+I+R+IGG+GVG AS+L P+YI+E+ PA+IRG+L S  Q  II G    +  NY +
Sbjct: 126 VPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFI 185

Query: 175 AHTAGSSTAEFWLGLPAWRWMFWMQIIPAGVFFLCLLGIPESPRYLVAKGKDAQAEAILS 234
           A +  +S    WL    WR+MF  + IPA +F + L  +PESPR+L+++GK  QAE IL 
Sbjct: 186 ARSGDAS----WLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMSRGKQEQAEGILR 241

Query: 235 RLFGAGQGAKKVEEIRASLSADHKPTFSDLLDPTTKKLRVILWAGLVLAVFQQLVGINIV 294
           ++ G     + V+EI+ SL    K     L+         ++  G++L++FQQ VGIN+V
Sbjct: 242 KIMGNTLATQAVQEIKHSLDHGRKTGGRLLMFGVG-----VIVIGVMLSIFQQFVGINVV 296

Query: 295 FYYGSVLWQSVGFTEDDSLKINILSGTLSILACLLAIGLIDKIGRKPLLLIGSAGMAVTL 354
            YY   +++++G + D +L   I+ G +++   +LAI  +DK GRKPL +IG+ GMA+ +
Sbjct: 297 LYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGM 356

Query: 355 GVLTWCFSTATTVNGALTLGDQIGLTALIAANLYVIFFNLSWGPVMWVMLGEMFPNQMRG 414
             L   F T              G+ AL++   YV  F +SWGPV WV+L E+FPN +RG
Sbjct: 357 FSLGTAFYTQAP-----------GIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRG 405

Query: 415 SALAVCGFAQWIANFAISVSFPALAAASL-------PMTYGFYALSAVVSFFLVQKLVHE 467
            ALA+   AQW+AN+ +S +FP +   S          +Y  Y    V++   + K V E
Sbjct: 406 KALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPE 465

Query: 468 TRGKELEAMQ 477
           T+GK LE ++
Sbjct: 466 TKGKTLEELE 475