Pairwise Alignments

Query, 383 a.a., cytochrome bd-type quinol oxidase, subunit 2 cydB from Caulobacter crescentus NA1000

Subject, 376 a.a., cytochrome d ubiquinol oxidase subunit II from Rhodanobacter sp. FW510-T8

 Score =  377 bits (969), Expect = e-109
 Identities = 192/368 (52%), Positives = 246/368 (66%), Gaps = 4/368 (1%)

Query: 5   VDFATLRVIWWALVGILLIGFALTDGFDMGVGALLPFVAKTDEERRMVINTVGATWEGNQ 64
           +D+ATLRVIWWAL+G LLIGFA+ DGFD GV  LL  + + +EER++++  +  TWEGNQ
Sbjct: 2   LDYATLRVIWWALLGTLLIGFAIMDGFDFGVAGLLKVLGRDNEERQVLLEGIEPTWEGNQ 61

Query: 65  VWFILGGGAIFAAWPFVYAISFSGFYLAMFVVLTAMILRPVGFKYRSKRQDPRWRAFWDW 124
           VWFIL  GA FAAWP +YA++FSG YLA+ +VL A+ILRPVGF +R K  DPRW + WDW
Sbjct: 62  VWFILAAGATFAAWPMLYAVAFSGMYLAIALVLLALILRPVGFNFRGKIHDPRWASLWDW 121

Query: 125 ALFVGGFVPVLCFGVALGNVLQGAPFRLDSDLRAFYDGSFLGLFSPFALLCGLLSVSMLV 184
            L   G V +L  GVA GN+  G PFR D DLR  + G FL L  PFALLCGL+S+ ML+
Sbjct: 122 VLTGSGLVVMLVAGVAFGNLFLGLPFRFDDDLRMGWHGGFLDLLHPFALLCGLVSLGMLL 181

Query: 185 LHGAAWITVKGEEGPVAERARRIGELAGLASIVLFAAGGFWVAFGGMGFRIEGLADAAGP 244
            HGA +  +K +   +A RA  I     LA  VL+   G W+A+G  G+ I G A  AG 
Sbjct: 182 AHGACFAALKADHA-IAARAVAIARWTTLAFAVLYVLAGVWLAWGIPGYAISGPAATAGV 240

Query: 245 SNPLRGAAAVREPGAWLDNYGRHGWMILAPVLGFAGAALALLGLRAKSAWMAFTGSSASA 304
           SNPL    AV   G+W   Y ++ W   AP+L  A AA+ +  L  + +   F  SS   
Sbjct: 241 SNPLYKQVAV--GGSWFAGYMQYPWFWAAPLLALA-AAVGVQALVGRRSVAGFIASSLMV 297

Query: 305 VGIIATVGLSMFPFILPSSVDPRSSLTVWNASSSHLTLFIMLVVTIVFLPLVLAYTAWVY 364
            G IA+ G ++FPF+LPSS+DPRSSLTVW+ASSSH TL +MLVVT+  LP+V+ YT WVY
Sbjct: 298 GGTIASAGFALFPFLLPSSLDPRSSLTVWDASSSHGTLRLMLVVTLALLPVVILYTGWVY 357

Query: 365 KVLWGRST 372
           +V+ GR T
Sbjct: 358 RVMRGRIT 365