Pairwise Alignments

Query, 383 a.a., cytochrome bd-type quinol oxidase, subunit 2 cydB from Caulobacter crescentus NA1000

Subject, 335 a.a., cytochrome d ubiquinol oxidase subunit II from Dickeya dadantii 3937

 Score =  154 bits (389), Expect = 3e-42
 Identities = 107/361 (29%), Positives = 174/361 (48%), Gaps = 38/361 (10%)

Query: 10  LRVIWWALVGILLIGFALTDGFDMGVGALLPFVAKTDEERRMVINTVGATWEGNQVWFIL 69
           L VIW+A++    + + + DGFD+G+G L PF  +   +R +++NTV   W+GN+ W +L
Sbjct: 5   LSVIWFAIIIFATLMYIVMDGFDLGIGMLFPF-HRHAADRDLMVNTVAPVWDGNETWLVL 63

Query: 70  GGGAIFAAWPFVYAISFSGFYLAMFVVLTAMILRPVGFKYRSKRQDPRWRAFWDWALFVG 129
           GG  +F A+P  YA+      + + ++L  +I R V F++R K   P  R FWD A   G
Sbjct: 64  GGAGLFGAFPLAYAVIVDALTIPLTLMLVGLIFRGVAFEFRFK-ATPSHRPFWDQAFMWG 122

Query: 130 GFVPVLCFGVALGNVLQGAPFRLDSDLRAFYDGSFLGLFSPFALLCGLLSVSMLVLHGAA 189
             V     GV +G VL G  F +       + G  LG  +PF+L CG+  V    L G  
Sbjct: 123 SLVATFFQGVTVGAVLNG--FEVTD---RHFSGPVLGWLTPFSLFCGVGLVVAYALLGCT 177

Query: 190 WITVKGEEGPVAERARRIGELAGLASIVLFAAGGFWVAFGGMGFRIEGLADAAGPSNPLR 249
           W+ +K  +    E  RR+  LA    + L A              I  ++     ++P  
Sbjct: 178 WLIMKTGQ----ELHRRMSALAPSLVVALLAV-------------IVVISLWTPLAHP-- 218

Query: 250 GAAAVREPGAWLDNYGRHGWMILAPVLGFAGAALALLGLRAKSAWMAFTGSSASAVGIIA 309
              A+++    L N     W +  P+L  A A   + G+R  + +  F  + A       
Sbjct: 219 ---AIKQRWFSLPNL---FWFLPVPLLVAACAVGIIRGVRRHAHYSPFLLTLALIFLGFT 272

Query: 310 TVGLSMFPFILPSSVDPRSSLTVWNASSSHLTLFIMLVVTIVFLPLVLAYTAWVYKVLWG 369
            +G+S++P I+P       SLT+W+A++   +   MLV  ++ +P++L YT W Y V  G
Sbjct: 273 GLGISLWPMIIP------PSLTLWDAAAPAQSQGFMLVGALLIIPVILGYTFWSYYVFRG 326

Query: 370 R 370
           +
Sbjct: 327 K 327