Pairwise Alignments

Query, 591 a.a., tRNA methyltransferase/FAD-dependent oxidoreductase MnmC from Caulobacter crescentus NA1000

Subject, 675 a.a., bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC from Pectobacterium carotovorum WPP14

 Score =  234 bits (597), Expect = 9e-66
 Identities = 207/661 (31%), Positives = 275/661 (41%), Gaps = 85/661 (12%)

Query: 3   PTAPSPLVWRDDGLPQSSLYGDVYFSSVDGLAETRAVFLAGCGLPERFAE--RRDFVVGE 60
           P   + L W   G P S  + DVYFS+ DGLAETR VFL G   PERF    R   V+ E
Sbjct: 5   PIQHASLSWNAQGTPVSQQFDDVYFSNQDGLAETRYVFLKGNQFPERFTTHPRAACVIAE 64

Query: 61  LGFGSGLNIAALLDLW---RREKPPGG--RLHIFSIEAHPLSRDEAARILAHWPELGEAA 115
            GFG+GLN   L   +   R+++P      LH  S E  PL R + A   A WPEL   A
Sbjct: 65  TGFGTGLNFLTLWQAFADFRQQQPQATLRHLHFISFEKFPLRRHDLAAAHAQWPELAAFA 124

Query: 116 QVLLDHWPGRARGFHRVDLPGFDAVLDLAVMDVVEALEAWDGL----ADAWFLDGFSPAL 171
             L + WP    G HR+ L      LDL   DV   L   D       DAWFLDGF+P+ 
Sbjct: 125 DELREQWPLPLPGCHRLILAQGTITLDLWFGDVNVLLPELDDTQNHQVDAWFLDGFAPSK 184

Query: 172 NPAMWRDEVLAAVGARSAPGARAATFTVAGAVRRGLSAAGFEIAKRPGFGRKRERLEAWR 231
           NP MW D +  A+          ATFT AG VRRGL  AGF+++K  GFG+KRE L    
Sbjct: 185 NPDMWTDNLFQAMARLCRKEGTFATFTAAGFVRRGLQQAGFQVSKIKGFGQKREMLSGIL 244

Query: 232 PGV-----------RPVAQRPETLAIIGGGIAGAALARAARAAGLEVTVI--DDADAVAA 278
           P             RP A   + +AIIGGGIA    A A +  G  +T+   D   A  A
Sbjct: 245 PDALPVMSPTPWYTRPAASTTDDIAIIGGGIASVLTALALQRRGANITLYCADALPATGA 304

Query: 279 SGNPAALVTPALDAGGGPRAALYAQALSRAVTLYEAQPDAVLARE-----VLQLAAGERD 333
           SGN    + P L+      +  ++ A   A   Y A     L  E     V QLA  E+ 
Sbjct: 305 SGNRQGALYPLLNNRHDAVSRFFSLAFDFAHRSYTALAQQGLEFEHQWCGVSQLAWDEKS 364

Query: 334 PARFATVAD----QDLFEPGDMRTLEAEDTRARLETPTPALAMAGARVIAPAEVTAA--- 386
             +   +      ++L    D + LE   T++ L      +       + PAE+TA+   
Sbjct: 365 TRKIEQILQGEWPEELVVSVDAQQLE---TQSGLNPGVNGITYPDGGWLCPAELTASALK 421

Query: 387 -----WAGPVVRRRVAKAERDGEGWRLLDAAGEIIARADRLALAGGAAGADL--LAEAPL 439
                     +   ++  E+  +GW L  + G+ +  A  + LA G    D       P 
Sbjct: 422 LAEQNGLSIQMSTAISTLEKTDDGWALTLSTGQQVNHAV-VVLANGHHITDWPQTRHLPA 480

Query: 440 RPVRGQASW-----TRGHGAPATAFGGYAIPT---REGLLFGATHDRDDTQTNVRSEDHA 491
             VRGQ S        G       + GY  P     +    GA++ R +T  + R ++  
Sbjct: 481 YAVRGQVSHIPTNPVLGKLKQVLCYDGYLTPVSPQHQTHCIGASYLRGETHCDYREDEQQ 540

Query: 492 RNLATLAKGLPAL--AARLAGSTFEGRAAIRATTPDRLPL-----------ADLRE---- 534
            N   L   LP    A  +  S  + R  +R    D LPL            D  E    
Sbjct: 541 ENRQRLLNCLPDADWAKTIDVSDGQARQGVRCALRDHLPLLGAVPNYEQTLTDYEERLHP 600

Query: 535 -------------DGVIVLTGLGSRGFCLAPLLAEHLVARLLDVPSPLPRQLSHLLKLTR 581
                          + ++  LGSRG C APL AE L +++   P PL R     L   R
Sbjct: 601 QHRADTVPSAPYWQDLFIIGALGSRGLCSAPLAAEILASQMYGEPLPLDRDTLAALNPNR 660

Query: 582 F 582
           F
Sbjct: 661 F 661