Pairwise Alignments

Query, 591 a.a., tRNA methyltransferase/FAD-dependent oxidoreductase MnmC from Caulobacter crescentus NA1000

Subject, 668 a.a., putative peptidase (VIMSS) from Escherichia coli BW25113

 Score =  224 bits (571), Expect = 9e-63
 Identities = 205/637 (32%), Positives = 268/637 (42%), Gaps = 76/637 (11%)

Query: 6   PSPLVWRDDGLPQSSLYGDVYFSSVDGLAETRAVFLAGCGLPERFAERRD--FVVGELGF 63
           P+ L +  +G P S  + DVYFS+ +GL ETR VFL G  L  RF E     FVV E GF
Sbjct: 8   PANLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLGGNQLEVRFPEHPHPLFVVAESGF 67

Query: 64  GSGLNIAAL---LDLWRREKPPGG--RLHIFSIEAHPLSRDEAARILAHWPELGEAAQVL 118
           G+GLN   L    D +R   P     RLH  S E  PL+R + A    HWPEL   A+ L
Sbjct: 68  GTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQL 127

Query: 119 LDHWPGRARGFHRVDLPGFDAVLDLAVMDVVEALEAWDGL----ADAWFLDGFSPALNPA 174
              WP    G HR+ L      LDL   D+ E     D       DAWFLDGF+PA NP 
Sbjct: 128 QAQWPMPLPGCHRLLLDEGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPD 187

Query: 175 MWRDEVLAAVGARSAPGARAATFTVAGAVRRGLSAAGFEIAKRPGFGRKRER-------- 226
           MW   +  A+   + PG   ATFT AG VRRGL  AGF + KR GFGRKRE         
Sbjct: 188 MWTQNLFNAMARLARPGGTLATFTSAGFVRRGLQDAGFTMQKRKGFGRKREMLCGVMEQT 247

Query: 227 --LEAWRPGVRPVAQRPETLAIIGGGIAGAALARAARAAGLEVTV--IDDADAVAASGNP 282
             L    P            AIIGGGIA A L+ A    G +VT+   D+A A+ ASGN 
Sbjct: 248 LPLPCSAPWFNRTGSSKREAAIIGGGIASALLSLALLRRGWQVTLYCADEAPALGASGNR 307

Query: 283 AALVTPALDAGGGPRAALYAQALSRAVTLYEAQPDAVLAR--EVLQLAAGERDPARFATV 340
              + P L          ++ A + A   Y+  P         V QL   E+   + A +
Sbjct: 308 QGALYPLLSKHDEALNRFFSNAFTFARRFYDQLPVKFDHDWCGVTQLGWDEKSQHKIAQM 367

Query: 341 ADQDLFEPGDMRT---LEAEDTRARLETPTPALAMAGARVIAPAEVT------AAWAGPV 391
              DL  P ++       A +    + T    +       + PAE+T      A   G  
Sbjct: 368 LSMDL--PAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVLELAQQQGLQ 425

Query: 392 V--RRRVAKAERDGEGWRLLDAAGEIIARADRLALAGG--AAGADLLAEAPLRPVRGQAS 447
           +  + ++    R  + W LL+ AG+  A    + LA G   +     +  P+  V GQ S
Sbjct: 426 IYYQYQLQNLSRKDDCW-LLNFAGDQQATHSVVVLANGHQISRFSQTSTLPVYSVAGQVS 484

Query: 448 W-----TRGHGAPATAFGGYAI---PTREGLLFGATHDRDDTQTNVRSEDHARNLATLAK 499
                           + GY     P  +    GA++ R    T    +D  +N   L  
Sbjct: 485 HIPTTPELAELKQVLCYDGYLTPQNPANQHHCIGASYHRGSEDTAYSEDDQQQNRQRLID 544

Query: 500 GLPAL--AARLAGSTFEGRAAIRATTPDRLPL--------------ADLRE--------- 534
             P    A  +  S  E R  +R  T D LP+              A L E         
Sbjct: 545 CFPQAQWAKEVDVSDKEARCGVRCATRDHLPMVGNVPDYEATLVEYASLAEQKDEAVSAP 604

Query: 535 --DGVIVLTGLGSRGFCLAPLLAEHLVARLLDVPSPL 569
             D + +   LGSRG C APL AE L A++ D P P+
Sbjct: 605 VFDDLFMFAALGSRGLCSAPLCAEILAAQMSDEPIPM 641