Pairwise Alignments

Query, 807 a.a., PAS family GGDEF/EAL protein from Caulobacter crescentus NA1000

Subject, 644 a.a., diguanylate cyclase from Agrobacterium fabrum C58

 Score =  360 bits (924), Expect = e-103
 Identities = 202/440 (45%), Positives = 273/440 (62%), Gaps = 7/440 (1%)

Query: 341 RGVGADITQAREDQE----RISHLAHYDVLTQLPNRLSLLQNLGKAWMDHGRDKTSGCAV 396
           RG+  D+  A  + +    R+ H A++D LT LPNR    Q L +  +      T   A+
Sbjct: 202 RGLTDDLRAATLELQAKNVRLEHDAYHDALTGLPNRSLFRQELIER-LRRSFGGTGTTAI 260

Query: 397 LCLDLDHFKGVNDSLGHPVGDALLMQVASRLRSCVGETGMVARLGGDEFAVVCAPSPGHE 456
           L LDLD FK VND+LGH  GDALL  VA RL +  G+  MV RLGGDEFAVV +     +
Sbjct: 261 LLLDLDGFKDVNDTLGHDAGDALLQAVAQRLSAIGGDYDMVCRLGGDEFAVV-SDDLNED 319

Query: 457 ALSALSQSIVETLSAPYDILGHNVLIGASVGIAVAPFDADDPDGLLKNADLALYRAKGDG 516
           A   LS  +++ +S  Y +    V IG  +GIA++   A D D L K ADLALY AK  G
Sbjct: 320 AARRLSTKLIDQISRTYQLGEQEVKIGTCIGIAIS-HGAVDADELFKRADLALYEAKAIG 378

Query: 517 RGAYRFFETAMDVWAQERRALEMDLREALARDELKLFFQPLIGRRDNETTGFEALLRWQH 576
            G    F+  M     E+++ E DL+ AL  DE+++++QP +  +  +  GFEALLRW+H
Sbjct: 379 PGRASVFKVRMQKQLTEKKSFEADLQTALQNDEMEVYYQPQVATQTRKLCGFEALLRWKH 438

Query: 577 PTRGLVPPSDFIECAEQWGLIGRIGEWVLNEACRTAATWPSHLTVAVNLSPNQFASGDLV 636
           P RG VPPS FI  AE+ GLI  +G+WV+  ACR A  W   + VAVNLSP QF S +L+
Sbjct: 439 PVRGDVPPSVFIPVAERTGLIHSLGKWVMETACREAMGWDEDMKVAVNLSPVQFHSTNLI 498

Query: 637 DQVRAALKASGLAPARLELEITEGLLLHDSAKTLEQLAALKALGVKIAMDDFGTGYSSLA 696
             V  AL+ SGL P+RLELEITE +LL+ S +T+  L+ LKA+G+KIAMDDFGTGYSSLA
Sbjct: 499 QNVMGALEKSGLEPSRLELEITESILLNKSDQTINTLSRLKAVGIKIAMDDFGTGYSSLA 558

Query: 697 YLWRFPFDKIKIDRSFVAEMQDNVAIADILRTIALLGQTLNLEVTAEGVETQAQARLLAE 756
            L   PFDKIKIDRSF+ ++  +     I+  +  +G++L +   AEG+ET+ Q   +  
Sbjct: 559 NLRGVPFDKIKIDRSFLRDITSDRDALAIVEFVVGVGRSLRMTTIAEGIETEEQYECVRR 618

Query: 757 MRCDQFQGFLFGRPMPVGDI 776
           + CDQ QG+L  RP+P  ++
Sbjct: 619 LGCDQVQGYLISRPLPAKEL 638