Pairwise Alignments

Query, 406 a.a., nitrate transporter (from data) from Caulobacter crescentus NA1000

Subject, 465 a.a., nitrate/nitrite transporter NarK from Pseudomonas simiae WCS417

 Score =  107 bits (267), Expect = 7e-28
 Identities = 108/410 (26%), Positives = 173/410 (42%), Gaps = 61/410 (14%)

Query: 24  LSFMVWVILGPLGVAI-AKDFNLDPAQKGLMVAVPVLAGAVLRLVNGVLVDRIGPKK-TG 81
           L+F VW++   + V + A  F+    Q   + A+P L+GA LR+    +V   G ++ T 
Sbjct: 45  LAFAVWMVWSTVIVRLNAIGFSFTTDQLFWLAALPGLSGATLRVFYSFMVPIFGGRRWTA 104

Query: 82  IIGQLIVLAGLVTAWAVGLHN--YQQILALGLVLGVAGASFAVALPLASRWYPQEHQGLA 139
           +    ++L  L   +AV   +  Y   + + L+ G  G +FA ++   S +YP+  QG A
Sbjct: 105 LSTASLLLPSLWMGFAVQDPSTPYSVFVLIALLCGFGGGNFASSMSNISFFYPKAQQGTA 164

Query: 140 LGI-AGAGNSGTALAALFAPALAKTFGWQNVIGLAAIPLA-----------FAFVAYLVL 187
           LG+ AG GN G ++     P L  TFG   +IG     LA           F +V +++L
Sbjct: 165 LGLNAGLGNLGVSVMQFCVP-LVITFGVFGLIGGQPQTLADGSQLWLQNAGFIWVPFIIL 223

Query: 188 AKDA------PEQPAPKKLAEYLDVLKVPDAWWLMLLYGVTFGGFVGLASSLTMYFNSEY 241
              A          A    ++   + K    W +  LY  TFG F+G +++  +   + +
Sbjct: 224 VTVAAWFGMNDLSSARASFSDQAVIFKRKHNWLMCWLYLATFGSFIGFSAAFPLLIKTSF 283

Query: 242 GLDPVIAGFFTAACVFAGSFIRPVGGALADRYGGVRTLGVVYVLAAIGLTVAGFQLPS-- 299
               V+A  F       G+ +RP+GG LAD+ GG R     +VL  + +      LP   
Sbjct: 284 --PDVVALKFAFLGPLVGALVRPLGGWLADKLGGARVTLWNFVLMIVMVFGVLHFLPQNQ 341

Query: 300 ------AGLALAVLLFAMLALGAGNGAVFQLAPQRFR----------------------- 330
                   L L +LLF  +  G GNG+ F++ P  FR                       
Sbjct: 342 QGGNFYGFLGLFMLLF--ITTGIGNGSTFRMIPVIFRTLHEKASVGKPAAVREQALKDAS 399

Query: 331 NEIGVMTGLIGMTGGIGGFYLASTLGLAKKMTGSYQSG---FIGFALLAV 377
            E   + G     G  G F++  + G +   TGS       F+GF L  +
Sbjct: 400 KESAAVLGFSSAMGAFGAFFIPKSFGSSMAATGSPAMAFYLFVGFYLSCI 449