Pairwise Alignments

Query, 406 a.a., nitrate transporter (from data) from Caulobacter crescentus NA1000

Subject, 404 a.a., Nitrate/nitrite transporter from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  287 bits (735), Expect = 3e-82
 Identities = 158/401 (39%), Positives = 230/401 (57%), Gaps = 7/401 (1%)

Query: 4   REFLKAGHAPTLFAAFLYFDLSFMVWVILGPLGVAIAKDFNLDPAQKGLMVAVPVLAGAV 63
           R FLKAGH+PTL A+F+YF     VWV  G +   I     L PAQ G+M++VP+ AGA+
Sbjct: 5   RAFLKAGHSPTLLASFVYFTYCCGVWVTNGAMAPFIKDALQLSPAQLGVMLSVPIFAGAL 64

Query: 64  LRLVNGVLVDRIGPKKTGIIGQLIVLAGLVTAWAVG---LHNYQQILALGLVLGVAGASF 120
           +R   GVL   IG K       L+ + G+  A   G   +  +  +LA+G++LG+AGASF
Sbjct: 65  MRFPLGVLAQYIGRKNA----TLVEMGGIAIALLFGYFFVDTFNDLLAMGVLLGIAGASF 120

Query: 121 AVALPLASRWYPQEHQGLALGIAGAGNSGTALAALFAPALAKTFGWQNVIGLAAIPLAFA 180
            VAL L S  +P  ++GLA+G+ GAGN GT+L+ALFAP LA+ +GWQ+V G+AA+ L   
Sbjct: 121 GVALSLGSGSFPARYKGLAMGLVGAGNVGTSLSALFAPQLAQAYGWQSVYGMAALGLLLP 180

Query: 181 FVAYLVLAKDAPEQPAPKKLAEYLDVLKVPDAWWLMLLYGVTFGGFVGLASSLTMYFNSE 240
               +V A++  +      L E+   L   D W    +Y +TFGGF+GL + L  Y+  +
Sbjct: 181 VAVMIVFAREPDDVDKHAGLREHAACLFEKDGWAFSAIYAITFGGFIGLTTFLPSYYYDQ 240

Query: 241 YGLDPVIAGFFTAACVFAGSFIRPVGGALADRYGGVRTLGVVYVLAAIGLTVAGFQLPSA 300
           +G+  V AG  T    F G+ +R  GG ++D +GG+ TL  V ++ A  L   G    S 
Sbjct: 241 FGVSKVQAGQLTMLAAFMGAALRIFGGWISDHWGGINTLTAVLIVIAGSLLACGLAGGSL 300

Query: 301 GLALAVLLFAMLALGAGNGAVFQLAPQRFRNEIGVMTGLIGMTGGIGGFYLASTLGLAKK 360
            +   +L+    ALGAGNGA+FQL P R+     V   +IG  G +GG  + + +GL+++
Sbjct: 301 VVTTLLLMLCFAALGAGNGALFQLVPLRWPLTTAVAGSMIGEIGALGGGLVPNAMGLSRQ 360

Query: 361 MTGSYQSGFIGFALLAVFALIALFSLKARWRAVWPTLHGDA 401
            TG+Y  GF  FA+LA+ AL  +  ++ RW   W    G A
Sbjct: 361 YTGTYFWGFALFAVLALCALGMMRFMQIRWTRTWAEKGGRA 401