Pairwise Alignments

Query, 406 a.a., nitrate transporter (from data) from Caulobacter crescentus NA1000

Subject, 465 a.a., Nitrate/nitrite transporter from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  122 bits (305), Expect = 3e-32
 Identities = 109/415 (26%), Positives = 183/415 (44%), Gaps = 51/415 (12%)

Query: 24  LSFMVWVILGPLGVAIAK-DFNLDPAQKGLMVAVPVLAGAVLRLVNGVLVDRIGPKK-TG 81
           L+F VW++   + V + K  FN    Q  ++ A+P ++GA+LR+    +V   G ++ T 
Sbjct: 47  LAFCVWMLFSAVAVNLPKVGFNFTTDQLFMLTALPSVSGALLRVPYSFMVPLFGGRRWTA 106

Query: 82  IIGQLIVLAGLVTAWAVGLHN--YQQILALGLVLGVAGASFAVALPLASRWYPQEHQGLA 139
               ++++  +   +AV   +  +   + + L+ G AGA+FA ++   S ++P++ QG A
Sbjct: 107 FSTGILIVPCVWLGFAVQDTSTPFSTFIIISLLCGFAGANFASSMANISFFFPKQKQGGA 166

Query: 140 LGI-AGAGNSGTALAALFAPALAK-----TFGWQNV-----IGLAAIPLAFAFVAYLVLA 188
           LG+  G GN G ++  L AP +        FG   V       L     A+ +V +L + 
Sbjct: 167 LGLNGGLGNMGVSVMQLVAPLVVSLSIFAAFGSHGVEQPDGSQLYLANAAWIWVPFLAIF 226

Query: 189 KDAP----EQPAPKK--LAEYLDVLKVPDAWWLMLLYGVTFGGFVGLASSLTMYFNSEYG 242
             A      + A  K  L E L VLK    W + LLY  TFG F+G ++   M   +++ 
Sbjct: 227 TLAAWFGMNELATSKASLKEQLPVLKRGHLWIMSLLYLATFGSFIGFSAGFAMLSKTQFP 286

Query: 243 LDPVIAGFFTAACVFAGSFIRPVGGALADRYGGVRTLGVVYVLAAIGLTVAGFQLPSAGL 302
              ++   F     F G+  R  GGA++DR GG R   + +VL AI   +    LP+ G+
Sbjct: 287 DVQILHYAFFGP--FIGALARSAGGAISDRLGGTRVTLINFVLMAIFSGLLFLTLPTGGV 344

Query: 303 A------LAVLLFAMLALGAGNGAVFQLAPQRFR----------------------NEIG 334
                    V L   L  G G+G+ FQ+    FR                       +  
Sbjct: 345 GGSFIAFYGVFLALFLTAGLGSGSTFQMISVIFRKLTMDRVKAEGGSEERAMREAATDTA 404

Query: 335 VMTGLIGMTGGIGGFYLASTLGLAKKMTGSYQSGFIGFALLAVFALIALFSLKAR 389
              G I   G IGGF++    G +  +TGS       F +  +  ++  +++  R
Sbjct: 405 AALGFISAIGAIGGFFIPKAFGSSLALTGSPVGAMKVFLIFYIACVVITWAVYGR 459