Pairwise Alignments

Query, 406 a.a., nitrate transporter (from data) from Caulobacter crescentus NA1000

Subject, 463 a.a., NarK family nitrate/nitrite MFS transporter from Dickeya dianthicola ME23

 Score =  119 bits (299), Expect = 1e-31
 Identities = 112/421 (26%), Positives = 178/421 (42%), Gaps = 61/421 (14%)

Query: 24  LSFMVWVILGPLGVAIAK-DFNLDPAQKGLMVAVPVLAGAVLRLVNGVLVDRIGPKKTGI 82
           L+F VW++   + V + K  F+    Q  ++ A+P ++GA+LR+    ++   G ++   
Sbjct: 48  LAFCVWMLFSTVAVNLNKVGFHFTTEQLFMLTALPSVSGALLRVPYSFVIPLAGGRRWTT 107

Query: 83  IGQLIVLAGLVTAWAVGLHN---YQQILALGLVLGVAGASFAVALPLASRWYPQEHQGLA 139
              LI++   V    V       Y   + + L+ G AGA+FA ++   S ++P+  QG A
Sbjct: 108 FSTLILIIPCVWLGFVVQDPQTPYSTFIIISLLCGFAGANFASSMANISFFFPKARQGGA 167

Query: 140 LGIAGA-GNSGTALAALFAPAL-------------AKTFGWQNVIGLAAIPLAFAFVAYL 185
           LG+ G  GN G ++  L  P +             A+  G Q  + L   P  + +V  L
Sbjct: 168 LGLNGGFGNLGVSVMQLLVPVVIFLPVLSFTGKGVAQPDGGQ--VWLQNAP--WVWVPLL 223

Query: 186 VLAKDAPE------QPAPKKLAEYLDVLKVPDAWWLMLLYGVTFGGFVGLASSLTMYFNS 239
           ++A  A          A   L + L VLK    W L +LY   FG F+G ++   M   +
Sbjct: 224 LIASAAAWFGMNDLSTAKASLRQQLPVLKRAHLWILSVLYLSAFGSFIGFSAGFAMLSKT 283

Query: 240 EYGLDPVIAGFFTAACVFAGSFIRPVGGALADRYGGVRTLGVVYVLAAIGLTVAGFQLP- 298
           ++    VI   +       G+  RPVGG L+DR+GGVR   + +V  AI   +    LP 
Sbjct: 284 QF--PDVIILHYAFCGPLLGALARPVGGMLSDRFGGVRVTLINFVFMAILSVLLFTALPG 341

Query: 299 -----SAGLALAVLLFAMLALGAGNGAVFQLAPQRFR----------------------N 331
                S  L   + +   L  G G+G+ FQ+    FR                       
Sbjct: 342 DNQPGSFLLFFGIFMLLFLTAGLGSGSTFQMIAVIFRGLTVERVTSAGGGEDEAQRSAVT 401

Query: 332 EIGVMTGLIGMTGGIGGFYLASTLGLAKKMTGSYQSG---FIGFALLAVFALIALFSLKA 388
           +     G I   G IGGF++    G +  MTGS       F+ F +  VF     +  K+
Sbjct: 402 DTAAALGFISAIGAIGGFFIPKAFGTSLAMTGSPAGAMKIFVVFYIACVFITWLCYGRKS 461

Query: 389 R 389
           R
Sbjct: 462 R 462