Pairwise Alignments

Query, 406 a.a., nitrate transporter (from data) from Caulobacter crescentus NA1000

Subject, 462 a.a., nitrate/nitrite transporter from Escherichia coli BL21

 Score =  128 bits (321), Expect = 4e-34
 Identities = 109/392 (27%), Positives = 177/392 (45%), Gaps = 56/392 (14%)

Query: 24  LSFMVWVILGPLGVAIAK-DFNLDPAQKGLMVAVPVLAGAVLRLVNGVLVDRIGPKKTGI 82
           L+F VW++   + V + K  FN    Q  L+ A+P ++GA+LR+    +V   G ++  I
Sbjct: 45  LAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTI 104

Query: 83  IGQLIVLAGLVTAW-AVGLHN----YQQILALGLVLGVAGASFAVALPLASRWYPQEHQG 137
               I++   V  W  + + N    +   + + L+ G AGA+FA ++   S ++P+  QG
Sbjct: 105 FSTAILIIPCV--WLGIAVQNPNTPFGIFIVIALLCGFAGANFASSMGNISFFFPKAKQG 162

Query: 138 LALGI-AGAGNSGTALAALFAPAL--AKTFGWQNVIG--------LAAIPLAFAFVAYLV 186
            ALGI  G GN G ++  L AP +     F +  V G        ++    A+ +V  L 
Sbjct: 163 SALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLA 222

Query: 187 LAKDAPEQ------PAPKKLAEYLDVLKVPDAWWLMLLYGVTFGGFVGLASSLTMYFNSE 240
           +A  A          +   +A+ L VL+    W L LLY  TFG F+G ++   M   ++
Sbjct: 223 IATIAAWSGMNDIASSRASIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQ 282

Query: 241 Y-GLDPVIAGFFTAACVFAGSFIRPVGGALADRYGGVRTLGVVYVLAAIGLTVAGFQLPS 299
           +  ++ +   FF     F G+  R VGGA++D++GGVR   + ++  AI   +    LP 
Sbjct: 283 FPDVNILRLAFFGP---FIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPG 339

Query: 300 AGLA-----LAVLLFAMLALGAGNGAVFQLAPQRFR----------------------NE 332
            G        AV +   L  G G+G+ FQ+    FR                       E
Sbjct: 340 TGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQKEAVTE 399

Query: 333 IGVMTGLIGMTGGIGGFYLASTLGLAKKMTGS 364
                G I   G +GGF++    G++  MTGS
Sbjct: 400 TAAALGFISAIGAVGGFFIPQAFGMSLNMTGS 431