Pairwise Alignments

Query, 406 a.a., nitrate transporter (from data) from Caulobacter crescentus NA1000

Subject, 463 a.a., nitrate/nitrite transporter from Escherichia coli BL21

 Score =  125 bits (313), Expect = 3e-33
 Identities = 113/417 (27%), Positives = 181/417 (43%), Gaps = 55/417 (13%)

Query: 24  LSFMVWVILGPLGVAIAK-DFNLDPAQKGLMVAVPVLAGAVLRLVNGVLVDRIGPKK-TG 81
           L+F VW++   + V + K  FN    Q  ++ A+P ++GA+LR+    +V   G ++ T 
Sbjct: 47  LAFCVWMLFSAVAVNLPKVGFNFTTDQLFMLTALPSVSGALLRVPYSFMVPIFGGRRWTA 106

Query: 82  IIGQLIVLAGLVTAWAVGLHN--YQQILALGLVLGVAGASFAVALPLASRWYPQEHQGLA 139
               ++++  +   +AV   +  Y   + + L+ G AGA+FA ++   S ++P++ QG A
Sbjct: 107 FSTGILIIPCVWLGFAVQDTSTPYSVFIIISLLCGFAGANFASSMANISFFFPKQKQGGA 166

Query: 140 LGI-AGAGNSGTALAALFAPALAK-----TFGWQNVIGLAAIPLAFA--------FVAYL 185
           LG+  G GN G ++  L AP +        FG Q V       L  A        F+A  
Sbjct: 167 LGLNGGLGNMGVSVMQLVAPLVVSLSIFAVFGSQGVKQPDGTELYLANASWIWVPFLAIF 226

Query: 186 VLA-----KDAPEQPAPKKLAEYLDVLKVPDAWWLMLLYGVTFGGFVGLASSLTMYFNSE 240
            +A      D     A  K  E L VLK    W + LLY  TFG F+G ++   M   ++
Sbjct: 227 TIAAWFGMNDLATSKASIK--EQLPVLKRGHLWIMSLLYLATFGSFIGFSAGFAMLSKTQ 284

Query: 241 YGLDPVIAGFFTAACVFAGSFIRPVGGALADRYGGVRTLGVVYVLAAIGLTVAGFQLPSA 300
           +    ++   F     F G+  R  GGAL+DR GG R   V ++L AI   +    LP+ 
Sbjct: 285 FPDVQILQYAFFGP--FIGALARSAGGALSDRLGGTRVTLVNFILMAIFSGLLFLTLPTD 342

Query: 301 GLA------LAVLLFAMLALGAGNGAVFQLAPQRFR----------------------NE 332
           G         AV L   L  G G+G+ FQ+    FR                       +
Sbjct: 343 GQGGSFMAFFAVFLALFLTAGLGSGSTFQMISVIFRKLTMDRVKAEGGSDERAMREAATD 402

Query: 333 IGVMTGLIGMTGGIGGFYLASTLGLAKKMTGSYQSGFIGFALLAVFALIALFSLKAR 389
                G I   G IGGF++    G +  +TGS       F +  +  ++  +++  R
Sbjct: 403 TAAALGFISAIGAIGGFFIPKAFGSSLALTGSPVGAMKVFLIFYIACVVITWAVYGR 459