Pairwise Alignments
Query, 387 a.a., hypothetical protein with pentapeptide repeats from Caulobacter crescentus NA1000
Subject, 215 a.a., hypothetical protein from Pseudomonas simiae WCS417
Score = 87.4 bits (215), Expect = 3e-22
Identities = 66/186 (35%), Positives = 92/186 (49%), Gaps = 16/186 (8%)
Query: 47 DLRGADLTGSDLSDARLEGVILEEAILFGALLERANLSLGRLQRADLRGANLRGAILDGA 106
+L+GADL DLS L G L EA L ANL L L++A L+GANL A L A
Sbjct: 42 NLKGADLRNQDLSKMNLAGADLREADL-----RHANLDLANLEKAQLQGANLTRASLQQA 96
Query: 107 DLRQVDFRSGKLAVADEASQFVMIRRDVSAARLESASITGATLDGARMDQVLMGEADLSE 166
+LR +F L F A+ E+A+++ A L AR+ M +A
Sbjct: 97 NLRLANFSGATLMAIQGWGLF------AQGAQFENANLSAAYLQFARLSGAKMHKA---- 146
Query: 167 CSLRGATMQGVRLKNARLRGADFSNANLAGADLRDADLTRAILVGTAIKGARIEGAIIEG 226
+LR A ++ L A L+GAD S+ANL A +++L +A L G+ A + A +EG
Sbjct: 147 -NLRAADLEMTWLSKADLQGADLSDANLQEAKFGESNLEQATLTGSRQHYANFQDANMEG 205
Query: 227 VLTAPT 232
PT
Sbjct: 206 CQDCPT 211
Score = 73.9 bits (180), Expect = 4e-18
Identities = 66/199 (33%), Positives = 98/199 (49%), Gaps = 33/199 (16%)
Query: 176 GVRLKNARLRGADFSNANLAGADLRDADLTRAILVGTAIKGARIEGAIIEGVLTAPTPAA 235
G LK A LR D S NLAGADLR+ADL A L ++ A+++GA + T A+
Sbjct: 40 GANLKGADLRNQDLSKMNLAGADLREADLRHANLDLANLEKAQLQGANL-------TRAS 92
Query: 236 IEAAPTLRQALDSHRQWFATGGASGQVARLEGRDLRPLGTLLANSELTALKARGACLAGM 295
++ A LR A S GA+ + ++G L G N+ L+A + A L+G
Sbjct: 93 LQQA-NLRLANFS--------GAT--LMAIQGWGLFAQGAQFENANLSAAYLQFARLSGA 141
Query: 296 VLAGAMLQGADLDEADLRGADLRGADLRGASLRGANLSQADLREADLRNLGLETGRDLTT 355
+ A L+ ADL+ L ADL+GADL A+L+ A +++L +A
Sbjct: 142 KMHKANLRAADLEMTWLSKADLQGADLSDANLQEAKFGESNLEQA--------------- 186
Query: 356 KLDGAMLRYADLREAKRSG 374
L G+ YA+ ++A G
Sbjct: 187 TLTGSRQHYANFQDANMEG 205
Score = 60.1 bits (144), Expect = 6e-14
Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 41/228 (17%)
Query: 118 LAVADEASQFVMIRRDVSAA---RLESASITGATLDGARMDQVLMGEADLSECSLRGATM 174
LA AD+ +I + A + A++ GA L + ++ + ADL E LR A +
Sbjct: 14 LAHADDGDDAPLIINGCTLAERSQCPGANLKGADLRNQDLSKMNLAGADLREADLRHANL 73
Query: 175 QGVRLKNARLRGADFSNANLAGADLRDADLTRAILVGTAIKGARIEGAIIEGVLTAPTPA 234
L+ A+L+GA+ + A+L A+LR A+ + A L+ G +GA E A
Sbjct: 74 DLANLEKAQLQGANLTRASLQQANLRLANFSGATLMAIQGWGLFAQGAQFEN-------A 126
Query: 235 AIEAAPTLRQALDSHRQWFATGGASGQVARLEGRDLRPLGTLLANSELTALKARGACLAG 294
+ AA Q ARL G + A+ E+T
Sbjct: 127 NLSAAYL-------------------QFARLSGAKMHKANLRAADLEMT----------- 156
Query: 295 MVLAGAMLQGADLDEADLRGADLRGADLRGASLRGANLSQADLREADL 342
L+ A LQGADL +A+L+ A ++L A+L G+ A+ ++A++
Sbjct: 157 -WLSKADLQGADLSDANLQEAKFGESNLEQATLTGSRQHYANFQDANM 203
Score = 55.8 bits (133), Expect = 1e-12
Identities = 46/136 (33%), Positives = 61/136 (44%), Gaps = 26/136 (19%)
Query: 275 TLLANSELTALKARGACLAGMVLAGAMLQGADLDEADLRGADLRGADLRGASLRGANLSQ 334
TL S+ +GA L L+ L GADL EADLR A+L A+L A L+GANL++
Sbjct: 31 TLAERSQCPGANLKGADLRNQDLSKMNLAGADLREADLRHANLDLANLEKAQLQGANLTR 90
Query: 335 ADLREADLR-------------------------NLGLETGRDLTTKLDGAMLRYADLRE 369
A L++A+LR N L +L GA + A+LR
Sbjct: 91 ASLQQANLRLANFSGATLMAIQGWGLFAQGAQFENANLSAAYLQFARLSGAKMHKANLRA 150
Query: 370 AKRSGNW-PQADTTGA 384
A W +AD GA
Sbjct: 151 ADLEMTWLSKADLQGA 166
Score = 38.5 bits (88), Expect = 2e-07
Identities = 47/167 (28%), Positives = 64/167 (38%), Gaps = 56/167 (33%)
Query: 37 DLRGLDLSHRDLRGADLTGSDLSDARLEGVILEEAILFGALL------------------ 78
DLR DLS +L GADL +DL A L+ LE+A L GA L
Sbjct: 47 DLRNQDLSKMNLAGADLREADLRHANLDLANLEKAQLQGANLTRASLQQANLRLANFSGA 106
Query: 79 -----------------ERANLSLGRLQRADLRGA-----NLRGAIL----------DGA 106
E ANLS LQ A L GA NLR A L GA
Sbjct: 107 TLMAIQGWGLFAQGAQFENANLSAAYLQFARLSGAKMHKANLRAADLEMTWLSKADLQGA 166
Query: 107 DLRQVDFRSGKLAVADEASQFVMIRRDVSAARLESASITGATLDGAR 153
DL + + K ++ + + ++ +R A+ A ++G +
Sbjct: 167 DLSDANLQEAKFGESN------LEQATLTGSRQHYANFQDANMEGCQ 207