Pairwise Alignments

Query, 387 a.a., hypothetical protein with pentapeptide repeats from Caulobacter crescentus NA1000

Subject, 583 a.a., Uncharacterized low-complexity proteins from Kangiella aquimarina DSM 16071

 Score = 91.3 bits (225), Expect = 6e-23
 Identities = 73/208 (35%), Positives = 97/208 (46%), Gaps = 26/208 (12%)

Query: 37  DLRGLDLSHRDLRGADLTGSDLSDARLEGVILEEAILF----------GALLERANLSLG 86
           DLRGLDLS  DL      G++L+ + L+GV L  + L           GA L  ANL   
Sbjct: 40  DLRGLDLSGCDLSEMSFVGANLAYSDLQGVALIASNLTDANLCYCNLTGAKLIAANLKQA 99

Query: 87  RLQRADLRGANLRGAILDGADLRQVDFRSGKLAVADEASQFVMIRRDVSAARLESASITG 146
            L  A+L  ANL  AI    DL  VD R   L   D   +  +   D+    LE   + G
Sbjct: 100 NLSHANLLHANLLTAICFRTDLSSVDLRDHDLRGQD-LREANLSGADLRNQNLEGLDMQG 158

Query: 147 ATLDGARMDQVLM----------GEADLSECSLRGATMQGVRLKNARLRGADFSNANLA- 195
           A L G +MD V +           + DLS C + G +++   L NA L G D S  NL+ 
Sbjct: 159 AKLIGTKMDNVNLRDTNLNKANLSDVDLSSCRIEGVSLKSANLSNANLSGLDLSGFNLSG 218

Query: 196 ----GADLRDADLTRAILVGTAIKGARI 219
               GADLR A+LT+A L    +  A++
Sbjct: 219 VNFKGADLRSANLTKANLDNAILSAAKL 246



 Score = 83.2 bits (204), Expect = 2e-20
 Identities = 74/257 (28%), Positives = 112/257 (43%), Gaps = 49/257 (19%)

Query: 91  ADLRGANLRGAILDGADLRQVDFRSGKLAVADEASQFVMIRRDVSAARLESASITGATLD 150
           A+  G +LRG  L G DL ++ F    LA +D      +I  +++ A L   ++TGA L 
Sbjct: 34  ANFDGQDLRGLDLSGCDLSEMSFVGANLAYSD-LQGVALIASNLTDANLCYCNLTGAKLI 92

Query: 151 GARMDQVLMGEADLSECSLRGA-----TMQGVRLKNARLRGADFSNANLAGADLRDADLT 205
            A + Q  +  A+L   +L  A      +  V L++  LRG D   ANL+GADLR+ +L 
Sbjct: 93  AANLKQANLSHANLLHANLLTAICFRTDLSSVDLRDHDLRGQDLREANLSGADLRNQNLE 152

Query: 206 RAILVGTAIKGARIEGAIIEGVLTAPTPAAIEAAPTLRQALDSHRQWFATGGASGQVARL 265
                G  ++GA++ G  ++ V                                      
Sbjct: 153 -----GLDMQGAKLIGTKMDNV-------------------------------------- 169

Query: 266 EGRDLRPLGTLLANSELTALKARGACLAGMVLAGAMLQGADLDEADLRGADLRGADLRGA 325
             RD       L++ +L++ +  G  L    L+ A L G DL   +L G + +GADLR A
Sbjct: 170 NLRDTNLNKANLSDVDLSSCRIEGVSLKSANLSNANLSGLDLSGFNLSGVNFKGADLRSA 229

Query: 326 SLRGANLSQADLREADL 342
           +L  ANL  A L  A L
Sbjct: 230 NLTKANLDNAILSAAKL 246



 Score = 76.3 bits (186), Expect = 2e-18
 Identities = 56/182 (30%), Positives = 84/182 (46%), Gaps = 11/182 (6%)

Query: 46  RDLRGADLTGSDLSDARLEGVILEEAILFGALLERANLSLGRLQRADLRGANLRGAILDG 105
           +DLRG DL+G DLS+    G  L  + L G  L  +NL+   L   +L GA L  A L  
Sbjct: 39  QDLRGLDLSGCDLSEMSFVGANLAYSDLQGVALIASNLTDANLCYCNLTGAKLIAANLKQ 98

Query: 106 ADLRQVDFRSGKLAVADEASQFVMIRRDVSAARLESASITGATLDGARMDQVLMGEADLS 165
           A+L   +     L  A      +  R D+S+  L    + G  L  A +       ADL 
Sbjct: 99  ANLSHANLLHANLLTA------ICFRTDLSSVDLRDHDLRGQDLREANLSG-----ADLR 147

Query: 166 ECSLRGATMQGVRLKNARLRGADFSNANLAGADLRDADLTRAILVGTAIKGARIEGAIIE 225
             +L G  MQG +L   ++   +  + NL  A+L D DL+   + G ++K A +  A + 
Sbjct: 148 NQNLEGLDMQGAKLIGTKMDNVNLRDTNLNKANLSDVDLSSCRIEGVSLKSANLSNANLS 207

Query: 226 GV 227
           G+
Sbjct: 208 GL 209



 Score = 68.2 bits (165), Expect = 6e-16
 Identities = 55/187 (29%), Positives = 91/187 (48%), Gaps = 9/187 (4%)

Query: 7   LDQRQLSQAAVAHARFRQGEGGRRLIMRFHDLRGLDLSHRDLRGADLTGSDLSDARLEGV 66
           L Q  LS A + HA        R  +    DLR  DL  +DLR A+L+G+DL +  LEG+
Sbjct: 96  LKQANLSHANLLHANLLTAICFRTDLSSV-DLRDHDLRGQDLREANLSGADLRNQNLEGL 154

Query: 67  ILEEAILFGALLERANLSLGRLQRADLRGANLRGAILDGADLRQVDFRSGKLAVADEASQ 126
            ++ A L G  ++  NL    L +A+L   +L    ++G  L+  +  +  L+  D  S 
Sbjct: 155 DMQGAKLIGTKMDNVNLRDTNLNKANLSDVDLSSCRIEGVSLKSANLSNANLSGLD-LSG 213

Query: 127 FVMIRRDVSAARLESASITGATLDGARMDQVLMGEADLSECSLRGATMQGVRLKNAR--L 184
           F +   +   A L SA++T A LD A     ++  A L +    G +++ +   +A    
Sbjct: 214 FNLSGVNFKGADLRSANLTKANLDNA-----ILSAAKLWQVQTNGWSIRNIECSHASWDQ 268

Query: 185 RGADFSN 191
           RG D+++
Sbjct: 269 RGRDYTH 275



 Score = 63.5 bits (153), Expect = 1e-14
 Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 24/209 (11%)

Query: 174 MQGVRLKNARLRGADFSNANLAGADLRDADLTRAILVGTAIKGARIEGAIIEGVLTAPTP 233
           MQG ++ N   +    ++AN  G DLR  DL+   L   +  GA +  + ++GV      
Sbjct: 16  MQGEKVWNQWRKENPKTHANFDGQDLRGLDLSGCDLSEMSFVGANLAYSDLQGV------ 69

Query: 234 AAIEAAPTLRQALDSHRQWFATGGASGQVARLEGRDLRPLGTLLAN--------SELTAL 285
                A       D++  +    GA    A L+  +L     L AN        ++L+++
Sbjct: 70  -----ALIASNLTDANLCYCNLTGAKLIAANLKQANLSHANLLHANLLTAICFRTDLSSV 124

Query: 286 KARGACLAGMVLAGAMLQGADLDEADLRGADLRGADLRGASLRGANLSQADLREADLRNL 345
             R   L G  L  A L GADL   +L G D++GA L G  +   NL   +L +A+L ++
Sbjct: 125 DLRDHDLRGQDLREANLSGADLRNQNLEGLDMQGAKLIGTKMDNVNLRDTNLNKANLSDV 184

Query: 346 GLETGRDLTTKLDGAMLRYADLREAKRSG 374
            L + R     ++G  L+ A+L  A  SG
Sbjct: 185 DLSSCR-----IEGVSLKSANLSNANLSG 208