Pairwise Alignments

Query, 527 a.a., endopygalactorunase from Caulobacter crescentus NA1000

Subject, 477 a.a., Endopolygalacturonase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  111 bits (277), Expect = 7e-29
 Identities = 117/417 (28%), Positives = 182/417 (43%), Gaps = 82/417 (19%)

Query: 38  VRDFGAKGDGVTIDSPAIDRAIAYAAERGGGTVLVPAGTYACYTIHLKSRIRLYLDQGAT 97
           + DFGA GDG T  S AI  AI   AE GGG V+VP G Y    I+L+S + L+L++ A 
Sbjct: 60  ISDFGAVGDGSTDASQAIKSAIQACAEAGGGKVVVPPGDYPTGPIYLESNVNLHLEKDAR 119

Query: 98  ILAASTPI----------EGMESGGYDHAEPMDPAYSSYQDFGHSHWRNSLIHGEGLND- 146
           ++ ++ P           EG+E   Y       P   ++++       N  I GEG+ D 
Sbjct: 120 LMFSTDPKDYLPLVYTRWEGVELMNYS------PLVYAFEE------ENIAITGEGILDG 167

Query: 147 IVIEGPGLIW-GK-------GLGRGHDYDK-----DMPISGKP------GVG----DKSI 183
              E     W GK       G  +  D DK      M   G P      G G     + +
Sbjct: 168 QANETNWWPWKGKTQYGYTEGDPQQEDADKRHALFQMAEDGVPVEERKFGEGFYLRPQFV 227

Query: 184 ALKNCRNVLLRDFKVLQGGWFALLATGVDNLTIDNLLIDT---NRDGLDIDCCRNVRITR 240
               C+NVL+   K++    + L     +N+TI+ + +++   N DG D +  +NV I  
Sbjct: 228 QPYRCKNVLVEGVKIVNSPMWILNPVLCENVTIEGVTVESHGPNSDGCDPESSKNVLIKD 287

Query: 241 CTINSPWDDAICPKSSYALGYPRV---TENLTISDCYVAGRYRIGSVLDGTWQVFMPAPK 297
           C  N+  DD I  KS       R+   +EN+ I +C +A         DG          
Sbjct: 288 CYFNTG-DDCIAIKSGRNADGRRINVPSENIIIQNCKMA---------DG---------- 327

Query: 298 GTHGRIKLGTESNGGFKNFTITNCVF-----DKCRGIALETVDGGALEDITITNITMHGG 352
             HG + +G+E +GG +N    NC       D+   I   ++ GG +EDI + NI +  G
Sbjct: 328 --HGGVVIGSEISGGVRNVFAENCEMNSPHLDRALRIKTSSMRGGIIEDIYLRNIDV--G 383

Query: 353 TTAPIFMRLGKRMRGPEGRPIGTLKRILISNITSSAGDRMPSIIAGLNGHPVEDIKI 409
             A   +R+        G  + T++ I + N+T   G ++  ++ G    PVE+I +
Sbjct: 384 QIAQQVVRVNMFYED-SGAYVPTVRNIHVENMTVENGGKVGVLLEGYENSPVENITL 439



 Score = 25.8 bits (55), Expect = 0.004
 Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 5/70 (7%)

Query: 180 DKSIALKNCRNVLLRDFKVLQGGWFALLATGVDNL-----TIDNLLIDTNRDGLDIDCCR 234
           D    +   RN+ + +  V  GG   +L  G +N      T++N+ I    +       +
Sbjct: 398 DSGAYVPTVRNIHVENMTVENGGKVGVLLEGYENSPVENITLENVNIKNAEEAYTFSNVK 457

Query: 235 NVRITRCTIN 244
            VR    TIN
Sbjct: 458 GVRFKNVTIN 467