Pairwise Alignments

Query, 259 a.a., putative membrane spanning protein from Caulobacter crescentus NA1000

Subject, 266 a.a., TSUP family transporter from Serratia liquefaciens MT49

 Score =  219 bits (557), Expect = 6e-62
 Identities = 112/248 (45%), Positives = 158/248 (63%)

Query: 1   MVSLDILASLFVVAALAGALDAIAGGGGLITLPALLLAGLSPVQALGTNKLQGAISALSS 60
           +V  ++L  LFVVA LAG +D+IAGGGGL+T+PALL  G+ P QAL TNKLQ    +LS+
Sbjct: 5   VVGPEMLGVLFVVALLAGFIDSIAGGGGLLTVPALLAVGVPPAQALATNKLQSVGGSLSA 64

Query: 61  TSAFARRGLIDWKTALPVAGASALAGLGGALCASLLSPEFLRAVVPLMLIAIALYFGLSR 120
           +  F RR  +D          + +  + GA+    +  + LR ++PL++I I LYF L+ 
Sbjct: 65  SLYFIRRRAVDLNDQKLTILLALIGSVAGAVLVQHMRADLLRQMLPLLVIGIGLYFLLTP 124

Query: 121 AIKAEDVTPRMALIPFACFVAPLIGFYDGIFGPGAGAFYMVAIVTLLGYGALKATAHTKL 180
            +   D   R++ +PF       +GFYDG FGPGAG+FY +A VTL G+   K+TAH K+
Sbjct: 125 RLGENDRQRRLSALPFGLVAGGCVGFYDGFFGPGAGSFYALAYVTLCGFNLAKSTAHAKV 184

Query: 181 ANAASNLGSLVLFTLKGAVVWPVGLVMAAGAFIGAQVGSRLAMRFGPKLIRPLLVVISCA 240
            N  SN GSLVLF + G V+W +GLVM  G  +GA++G+ + M  G KLIRP++V++S  
Sbjct: 185 LNFTSNFGSLVLFIIGGKVLWGIGLVMLVGQVLGARLGAHMVMTRGQKLIRPMIVIVSLV 244

Query: 241 MAVKLLAD 248
           M+ KLL D
Sbjct: 245 MSCKLLYD 252



 Score = 35.4 bits (80), Expect = 1e-06
 Identities = 33/123 (26%), Positives = 51/123 (41%), Gaps = 4/123 (3%)

Query: 127 VTPRMALIPFACFVAPLIGFYDGIFGPGAGAFYMVAIVTLLGYGALKATAHTKLANAASN 186
           V P M  + F   VA L GF D I   G G    V  +  +G    +A A  KL +   +
Sbjct: 6   VGPEMLGVLFV--VALLAGFIDSI--AGGGGLLTVPALLAVGVPPAQALATNKLQSVGGS 61

Query: 187 LGSLVLFTLKGAVVWPVGLVMAAGAFIGAQVGSRLAMRFGPKLIRPLLVVISCAMAVKLL 246
           L + + F  + AV      +    A IG+  G+ L       L+R +L ++   + +  L
Sbjct: 62  LSASLYFIRRRAVDLNDQKLTILLALIGSVAGAVLVQHMRADLLRQMLPLLVIGIGLYFL 121

Query: 247 ADP 249
             P
Sbjct: 122 LTP 124