Pairwise Alignments

Query, 300 a.a., RarD family membrane permease from Caulobacter crescentus NA1000

Subject, 295 a.a., RarD protein from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  210 bits (535), Expect = 3e-59
 Identities = 121/291 (41%), Positives = 171/291 (58%), Gaps = 10/291 (3%)

Query: 10  RSAYAAGVGCYLLWGFLPLYFHLLAKLGVTSWEMIAHRSLWSVLWALGLVLIARQVGQVA 69
           R  Y  G+  Y++WG  P+YF  +A   V + E+I HR+LWS L+   +++  +  G   
Sbjct: 7   RRGYILGLSAYIIWGLFPIYFKAIA--AVPAIEIIIHRALWSALFGSIVLMFWKHPGWWR 64

Query: 70  QVLRQPKTLGVLALTTLAIFSNWTIYVFAVNAGHVIEASLGYYINPLMNMAAGALLFRER 129
            +   P+ L VLAL+   I SNW IYV+AVN G ++EASLGYYINPL+N+  G LL  ER
Sbjct: 65  DLRNNPQRLAVLALSGTLIASNWIIYVWAVNNGRMLEASLGYYINPLVNVLLGMLLLGER 124

Query: 130 MSTEGKVAIGLAAVGVAIQTVALGHLPIVSLGLALTFCVYAILRKQVKADAQTGLFIECA 189
           +     +A+  AA+GVA Q   +G LP VSL L LTF  Y ++RKQ    A  GL +E  
Sbjct: 125 LRRLQMLAVAFAAIGVAHQVWHVGSLPWVSLALPLTFAFYGLIRKQAPVAALPGLVVE-T 183

Query: 190 YLALPGLAYVWFLQS----SGQGHFGDGASVTTLLALAGPATVVPLALFAWSARRLPLSA 245
           ++ +P LA +W   +    S Q  F    +    LA AGP T+VPL  F  +AR LP + 
Sbjct: 184 WMLVP-LALIWLAINPTAVSVQPEFWT-TTQAIWLAAAGPVTLVPLVCFNAAARHLPFTT 241

Query: 246 VGFLQFIAPTIQFLLGV-AFGEPFTPLRALSFVFIWLGVATFAYGAWRKAK 295
           +GFLQ++APT+  LL V  +GE  T    ++F FIW G+A ++   W K++
Sbjct: 242 LGFLQYVAPTLVLLLAVLLYGEHLTTSTLITFAFIWAGLAIYSVDIWLKSR 292