Pairwise Alignments

Query, 491 a.a., type II secretion pathway protein E from Caulobacter crescentus NA1000

Subject, 498 a.a., type II secretion system ATPase GspE from Dickeya dianthicola ME23

 Score =  480 bits (1235), Expect = e-140
 Identities = 257/483 (53%), Positives = 333/483 (68%), Gaps = 4/483 (0%)

Query: 4   PMLAYGFAKRNGVVLLS--LGERAVIGVREGYDPMALVEIRRAVGAPLAIEPMTAPVFDR 61
           P+L + FA+   ++LL       A +    G    AL+E RR  G PL +  ++   F+R
Sbjct: 13  PVLPFSFARAQQILLLQDESATAAEVVCVPGTPASALLEARRVAGVPLTVSQVSPEEFER 72

Query: 62  KFSEVYAGAGLATASSADSLDLEGGLGLLLEDMPAAADLLDPQDDAPVIRLINGLIAEAV 121
           +    Y           + +  +     L E++P + DLLD +DDAP+IRLIN ++ EA+
Sbjct: 73  QLVMRYQRDSEEARRLMEDIGNDIDFYTLAEELPDSDDLLDGEDDAPIIRLINAMLTEAI 132

Query: 122 RLGASDIHIEPFEKALIVRLRIDGVLTEVLSLSPRIAAMLVSRVKVMAKLDIAEKRVPQD 181
           +  ASDIHIE FE+ L++R RIDGVL E+L    ++A++LVSR+KVMAKLDIAEKRVPQD
Sbjct: 133 KHKASDIHIETFERHLLIRFRIDGVLREILRPQRQLASLLVSRIKVMAKLDIAEKRVPQD 192

Query: 182 GRISLALGGKSLDVRVSTLPARMGERVVMRILDKDQAGLRLSDLGMSPDVLSALETAVRE 241
           GR++L +GG+++DVRVSTLP+  GERVV+R+LDK+   L L  LGM+      ++T +  
Sbjct: 193 GRMALRIGGRAIDVRVSTLPSNYGERVVLRLLDKNSVRLDLETLGMAEHHRRQVDTLIHR 252

Query: 242 PHGIILVTGPTGSGKTTTLYAALAVLNDNSRNILTIEDPVEYAVHGIGQTQVNTKVGMTF 301
           PHGIILVTGPTGSGK+TTLYAAL+ LN   RNI+T+EDP+EY + GIGQTQVN KV MTF
Sbjct: 253 PHGIILVTGPTGSGKSTTLYAALSRLNSAERNIMTVEDPIEYELEGIGQTQVNPKVDMTF 312

Query: 302 AAGLRAILRQDPDVVMVGEIRDSETAQIAVQASLTGHLVLSTVHTNDAAGAVVRLRDMGV 361
           A GLRAILRQDPDVV+VGEIRD ETAQIAVQASLTGHLVLST+HTN A GA+ RL+DMG+
Sbjct: 313 ARGLRAILRQDPDVVLVGEIRDGETAQIAVQASLTGHLVLSTLHTNSALGALSRLQDMGI 372

Query: 362 EPFLLASTLRLVIAQRLVRRLCEHCRTPEPADAATAALVGLPEGEILYRPVGCAHCGHTG 421
           EPFLL+++L  V+AQRLVR LC  CR P   D   A   GL  G  LY P GC  C ++G
Sbjct: 373 EPFLLSTSLLGVLAQRLVRTLCPSCRQPYVIDDEQAKQTGLAAGTTLYHPGGCEKCNYSG 432

Query: 422 YQGRIGVYEALRVDDHLRRLIGGNASEQEITEAGLDRR--LGQEARNYVLAGLTTVEEAL 479
           Y+GR G++E L +DD +R  I    SE  I     D+R  + Q+  + VLAG+TT EE +
Sbjct: 433 YRGRTGIHELLLIDDVVRTAIHSGESELGIARMLGDKRVTIRQDGLDKVLAGVTTWEEVV 492

Query: 480 RIT 482
           R+T
Sbjct: 493 RVT 495