Pairwise Alignments

Query, 550 a.a., major facilitator superfamily transporter from Caulobacter crescentus NA1000

Subject, 500 a.a., glycine/betaine ABC transporter from Pseudomonas simiae WCS417

 Score =  199 bits (507), Expect = 2e-55
 Identities = 119/334 (35%), Positives = 184/334 (55%), Gaps = 22/334 (6%)

Query: 11  MRTVVSASSAGTAFEWYDFFIFGSLTQVISKTFFAGLNETAGYIAALALFGVGFAFRPLG 70
           +R  ++A++ G A EW+DF ++G +  V+ K FF   + +   IAAL  F V F  RPLG
Sbjct: 24  VRKAITAAALGNAMEWFDFGVYGFVAYVLGKVFFPDASPSVQMIAALGTFSVPFLIRPLG 83

Query: 71  ALVFGKIGDQDGRKGAFLATVLLMGGATFAIAFLPTYEQAGIIAPILLIILRCLQGFALG 130
            L FG +GD+ GR+    AT+++M  +TFAI  +P+Y   GI APILL++ +  QGF++G
Sbjct: 84  GLFFGALGDKYGRQKVLAATIVIMSLSTFAIGLIPSYASIGIWAPILLLLCKMAQGFSVG 143

Query: 131 GEYGGAAIYVAEHSPANKRGWATSWVQTSAAFG-LFGALLVILATRWVLGKYVGPDAFDE 189
           GEY GA+I+VAE++P  KRG+  SW+   +  G + GA +V+L     +   +G   F+ 
Sbjct: 144 GEYTGASIFVAEYAPDRKRGFLGSWLDFGSIAGFVLGAGVVVL-----ISSILGEADFES 198

Query: 190 WGWRIPFAVSLGLLGISVWMRLKLTESPTF-------EAMKAEG--QASKAPYAE-AFGQ 239
           WGWR+PF ++L L  I +++R  L E+P F       E    EG     K  + E A   
Sbjct: 199 WGWRLPFFLALPLGIIGLYLRHALEETPAFQQHMDKMEQGDREGLTHGPKVSFKEVATKH 258

Query: 240 WSNLKLVILAFVSMMCAQGAVWYTSFFYVQTFMEKFLKVDPVTINELMMIATAVSAIFYV 299
           W +L    L  + ++ A    +Y    Y+ +++   L         L++IA  V  +F  
Sbjct: 259 WRSL----LTCIGIVAATNVTYYMLLTYMPSYLSHNLHYKE-NSGVLIIIAIMVGMLFVQ 313

Query: 300 VF-GWLSDKVGRKPVMLGGMTLALLFYFPGFHLL 332
            F G++SDK+GRKP ++ G    L    P F L+
Sbjct: 314 PFIGFISDKIGRKPFIIAGSIGLLFLSIPAFMLI 347



 Score = 45.4 bits (106), Expect = 5e-09
 Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 2/96 (2%)

Query: 454 MILGVLFVFVIAATALFGPLAACLVELFPTRVRYTALSLPYHIGTGWVGGFVPFFAFAIV 513
           +I   L +  +      G +A+ L  +FPT +RY+AL+  +++    + G  P     +V
Sbjct: 354 LIFAGLLILAVILNFFIGVMASTLPAMFPTHLRYSALASAFNVSV-LIAGLTPTAVAWLV 412

Query: 514 AAVGNIYAGLWYPFAFTLLSVLTTLFLLPETKERPL 549
            +  ++Y   +Y   F ++ ++T L  + ET  +PL
Sbjct: 413 ESTNDLYMPAYYLMVFAVVGLITGL-TMKETANKPL 447