Pairwise Alignments

Query, 550 a.a., major facilitator superfamily transporter from Caulobacter crescentus NA1000

Subject, 500 a.a., osmosensory proline/betaine/H+ permease from Pseudomonas putida KT2440

 Score =  198 bits (503), Expect = 5e-55
 Identities = 120/336 (35%), Positives = 186/336 (55%), Gaps = 22/336 (6%)

Query: 9   ASMRTVVSASSAGTAFEWYDFFIFGSLTQVISKTFFAGLNETAGYIAALALFGVGFAFRP 68
           A M+  ++A++ G A EW+DF ++G +   + K FF   + +   IAALA F V F  RP
Sbjct: 22  AKMKKAITAAALGNAMEWFDFGVYGFVAYALGKVFFPNADPSVQMIAALATFSVPFLIRP 81

Query: 69  LGALVFGKIGDQDGRKGAFLATVLLMGGATFAIAFLPTYEQAGIIAPILLIILRCLQGFA 128
           LG L FG +GD+ GR+    AT+++M  +TFAI  +P+Y   GI APILL++ +  QGF+
Sbjct: 82  LGGLFFGALGDRFGRQKILAATIVIMSLSTFAIGLIPSYASIGIWAPILLLLAKMAQGFS 141

Query: 129 LGGEYGGAAIYVAEHSPANKRGWATSWVQTSAAFG-LFGALLVILATRWVLGKYVGPDAF 187
           +GGEY GA+I+VAE++P  KRG+  SW+   +  G + GA +V+L     +   +G + F
Sbjct: 142 VGGEYTGASIFVAEYAPDRKRGFLGSWLDFGSIAGFVLGAGVVVL-----ISTVLGEEKF 196

Query: 188 DEWGWRIPFAVSLGLLGISVWMRLKLTESPTF-------EAMKAEGQAS--KAPYAEAFG 238
            +WGWR+PF ++L L  I +++R  L E+P F       E    EG AS  K  + E   
Sbjct: 197 LDWGWRLPFFLALPLGIIGLYLRHALEETPAFQQHVDKLEQGDREGLASGPKVSFKEVAT 256

Query: 239 Q-WSNLKLVILAFVSMMCAQGAVWYTSFFYVQTFMEKFLKVDPVTINELMMIATAVSAIF 297
           Q W +L    +  + ++ A    +Y    Y+ +++   L         L++IA  V  +F
Sbjct: 257 QHWRSL----VTCIGVVIATNVTYYMLLTYMPSYLSHNLHYSE-DHGVLIIIAIMVGMLF 311

Query: 298 -YVVFGWLSDKVGRKPVMLGGMTLALLFYFPGFHLL 332
              + G LSDK GR+P ++ G    L    P F L+
Sbjct: 312 VQPIIGLLSDKFGRRPFIIVGSVGLLALAIPAFMLI 347



 Score = 45.1 bits (105), Expect = 7e-09
 Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 6/99 (6%)

Query: 455 ILGVLFVFVIAATALF----GPLAACLVELFPTRVRYTALSLPYHIGTGWVGGFVPFFAF 510
           +LG++F  ++    L     G +A+ L  +FPT +RY+AL+  ++I    + G  P  A 
Sbjct: 351 VLGLIFAGLLIIAVLLNFFIGVMASTLPAMFPTHIRYSALASAFNISV-LIAGLTPTLAA 409

Query: 511 AIVAAVGNIYAGLWYPFAFTLLSVLTTLFLLPETKERPL 549
            +V    ++Y   +Y      + ++T L  + ET  +PL
Sbjct: 410 WLVETTNDLYMPAYYLMVIAAVGLVTGL-TMKETANKPL 447