Pairwise Alignments

Query, 550 a.a., major facilitator superfamily transporter from Caulobacter crescentus NA1000

Subject, 560 a.a., Permeases of the major facilitator superfamily from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  523 bits (1346), Expect = e-153
 Identities = 267/542 (49%), Positives = 345/542 (63%), Gaps = 12/542 (2%)

Query: 12  RTVVSASSAGTAFEWYDFFIFGSLTQVISKTFFAGLNETAGYIAALALFGVGFAFRPLGA 71
           R V+ ASS GT FEWYDF+++GSL  +I++ FF+GL+ T+ YI AL  F  GF  RP GA
Sbjct: 17  RKVIFASSLGTVFEWYDFYLYGSLAAIIARQFFSGLDPTSAYIFALLAFAAGFLVRPFGA 76

Query: 72  LVFGKIGDQDGRKGAFLATVLLMGGATFAIAFLPTYEQAGIIAPILLIILRCLQGFALGG 131
           + FG++GD  GRK  FL T+L+MG +TF +  LP+Y   G+ AP++LIILR LQG ALGG
Sbjct: 77  IFFGRLGDMIGRKYTFLVTILIMGASTFIVGLLPSYASIGLAAPVILIILRMLQGLALGG 136

Query: 132 EYGGAAIYVAEHSPANKRGWATSWVQTSAAFGLFGALLVILATRWVLGKYVGPDAFDEWG 191
           EYGGAA YVAEH+P  KRG  T+W+QT+A  GLF +LLVIL  R  +    G   F EWG
Sbjct: 137 EYGGAATYVAEHAPHGKRGAYTAWIQTTATLGLFLSLLVILGVRTAM----GDKEFGEWG 192

Query: 192 WRIPFAVSLGLLGISVWMRLKLTESPTFEAMKAEGQASKAPYAEAFGQWSNLKLVILAFV 251
           WRIPF VS+ LLGISVW+RL L ESP F+ MK+EG+ SKAP  E+FGQW NLK+VILA +
Sbjct: 193 WRIPFLVSILLLGISVWIRLSLNESPAFQKMKSEGKTSKAPLTESFGQWKNLKVVILALL 252

Query: 252 SMMCAQGAVWYTSFFYVQTFMEKFLKVDPVTINELMMIATAVSAIFYVVFGWLSDKVGRK 311
            +   Q  VWYT  FY   F+    KVD  T N L+  +  +   F++ FG LSDK+GRK
Sbjct: 253 GLTAGQAVVWYTGQFYALFFLTTIAKVDATTANLLIAASLLIGTPFFIFFGTLSDKIGRK 312

Query: 312 PVMLGGMTLALLFYFPGFHLLEKAANPALAEASAKAPVVVFADPKDCSLQFDPVGKTA-F 370
           P+++GG  +A L YF  F +L   ANPAL  A     V V AD K+CS Q  P+ +   F
Sbjct: 313 PIIMGGCLIAALTYFTVFPMLLNYANPALVAAQKANKVTVTADLKECSFQGSPIARDIDF 372

Query: 371 VTSCDIVKSTLANAGVSYANEAAPAGAVAVMRIGG------AEVLSKSAAGLGKDEVKAT 424
            TSCDI K  L  A + Y +   PAGA A + +G         VL++       D  K T
Sbjct: 373 RTSCDIAKRALTQAYIPYTSVQGPAGAPATVTMGDKVLNSPVGVLNEKRDAFAADSAK-T 431

Query: 425 KAEVEGRIKAALAGAGYPTKADPARMNMPMILGVLFVFVIAATALFGPLAACLVELFPTR 484
            A+    +       G  T ADPA+MN  M+L +L   VI  T ++GP+AA LVE+FPTR
Sbjct: 432 IADFRKALTDTAKAEGLTTPADPAKMNKGMVLLILVFLVILVTMVYGPIAAMLVEMFPTR 491

Query: 485 VRYTALSLPYHIGTGWVGGFVPFFAFAIVAAVGNIYAGLWYPFAFTLLSVLTTLFLLPET 544
           +RYT++SLPYHIG GW GG +P  AFA+VAA G+I+ GLWYP      + +  +  + ET
Sbjct: 492 IRYTSMSLPYHIGNGWFGGLLPTTAFAMVAATGDIFYGLWYPVIVAAGTFIIGMIFIRET 551

Query: 545 KE 546
           K+
Sbjct: 552 KD 553