Pairwise Alignments

Query, 550 a.a., major facilitator superfamily transporter from Caulobacter crescentus NA1000

Subject, 500 a.a., proline/glycine betaine transporter from Escherichia coli BL21

 Score =  197 bits (500), Expect = 1e-54
 Identities = 120/334 (35%), Positives = 182/334 (54%), Gaps = 22/334 (6%)

Query: 11  MRTVVSASSAGTAFEWYDFFIFGSLTQVISKTFFAGLNETAGYIAALALFGVGFAFRPLG 70
           +R  ++A+S G A EW+DF ++G +   + K FF G + +   +AALA F V F  RPLG
Sbjct: 23  LRKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMVAALATFSVPFLIRPLG 82

Query: 71  ALVFGKIGDQDGRKGAFLATVLLMGGATFAIAFLPTYEQAGIIAPILLIILRCLQGFALG 130
            L FG +GD+ GR+     T+++M  +TF I  +P+Y+  GI APILL+I +  QGF++G
Sbjct: 83  GLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYDTIGIWAPILLLICKMAQGFSVG 142

Query: 131 GEYGGAAIYVAEHSPANKRGWATSWVQTSAAFG-LFGALLVILATRWVLGKYVGPDAFDE 189
           GEY GA+I+VAE+SP  KRG+  SW+   +  G + GA +V+L     +   VG   F +
Sbjct: 143 GEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVL-----ISTIVGEANFLD 197

Query: 190 WGWRIPFAVSLGLLGISVWMRLKLTESPTF-------EAMKAEG--QASKAPYAE-AFGQ 239
           WGWRIPF ++L L  I +++R  L E+P F       E    EG     K  + E A   
Sbjct: 198 WGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGDREGLQDGPKVSFKEIATKY 257

Query: 240 WSNLKLVILAFVSMMCAQGAVWYTSFFYVQTFMEKFLKVDPVTINELMMIATAVSAIF-Y 298
           W +L    L  + ++ A    +Y    Y+ +++   L         L++IA  +  +F  
Sbjct: 258 WRSL----LTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSE-DHGVLIIIAIMIGMLFVQ 312

Query: 299 VVFGWLSDKVGRKPVMLGGMTLALLFYFPGFHLL 332
            V G LSD+ GR+P +L G     +   P F L+
Sbjct: 313 PVMGLLSDRFGRRPFVLLGSVALFVLAIPAFILI 346



 Score = 43.5 bits (101), Expect = 2e-08
 Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 2/96 (2%)

Query: 454 MILGVLFVFVIAATALFGPLAACLVELFPTRVRYTALSLPYHIGTGWVGGFVPFFAFAIV 513
           +I   L +  +      G +A+ L  +FPT +RY+AL+  ++I    V G  P  A  +V
Sbjct: 353 LIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISV-LVAGLTPTLAAWLV 411

Query: 514 AAVGNIYAGLWYPFAFTLLSVLTTLFLLPETKERPL 549
            +  N+    +Y     ++ ++T +  + ET  RPL
Sbjct: 412 ESSQNLMMPAYYLMVVAVVGLITGV-TMKETANRPL 446