Pairwise Alignments

Query, 206 a.a., alkylated DNA repair protein AlkB from Caulobacter crescentus NA1000

Subject, 216 a.a., oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions (NCBI) from Escherichia coli BW25113

 Score =  144 bits (362), Expect = 2e-39
 Identities = 79/186 (42%), Positives = 107/186 (57%), Gaps = 5/186 (2%)

Query: 22  SAQRALVEAVLAGAEQAPFSNYRTAYGKPMSVAMTALGSLGWTSDARGYRYVDRHPETGR 81
           +A   L+  +   A Q+PF    T  G  MSVAMT  G LGWT+  +GY Y    P+T +
Sbjct: 28  NAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCGHLGWTTHRQGYLYSPIDPQTNK 87

Query: 82  PWPDMPPALLDLW----TVLGDPETPPDSCLVNLYRDGARMGLHQDRDEADPRFPVLSIS 137
           PWP MP +  +L     T  G P+  PD+CL+N Y  GA++ LHQD+DE D R P++S+S
Sbjct: 88  PWPAMPQSFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVS 147

Query: 138 LGDTAVFRIGGVNRKDPTRSLRLASGDVCRLLGPARLAFHGVDRILPGSSSLVPGGGRIN 197
           LG  A+F+ GG+ R DP + L L  GDV    G +RL +HG+  +  G   L     R N
Sbjct: 148 LGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPLTI-DCRYN 206

Query: 198 LTLRRA 203
           LT R+A
Sbjct: 207 LTFRQA 212