Pairwise Alignments

Query, 206 a.a., alkylated DNA repair protein AlkB from Caulobacter crescentus NA1000

Subject, 217 a.a., DNA oxidative demethylase AlkB from Dickeya dianthicola 67-19

 Score =  145 bits (367), Expect = 4e-40
 Identities = 89/204 (43%), Positives = 115/204 (56%), Gaps = 12/204 (5%)

Query: 7   TVVPGFDVWPGLLDISAQRALVEAVLAGAEQAPFSNYRTAYGKPMSVAMTALGSLGWTSD 66
           T+VPG  +  G     A   L+ A+    +++PF +  T  G  MSVAM+  G LGW SD
Sbjct: 17  TLVPGAMLLRGFAWPQAGE-LLAALEQVTQRSPFRHMVTPGGHTMSVAMSNCGPLGWVSD 75

Query: 67  ARGYRYVDRHPETGRPWPDMPPALLDLW----TVLGDPETPPDSCLVNLYRDGARMGLHQ 122
            +GYRY  + P TG+PWP MP     L     +  G P   PD+CL+N Y  GA++ LHQ
Sbjct: 76  EQGYRYSTQDPLTGQPWPAMPAVFRQLSQAAASAAGYPGFTPDACLINRYAVGAKLSLHQ 135

Query: 123 DRDEADPRFPVLSISLGDTAVFRIGGVNRKDPTRSLRLASGDVCRLLGPARLAFHGVDRI 182
           DRDE D R P++S+SLG +AVF  GG  R DP R L L  GDV    GP+RL +H    I
Sbjct: 136 DRDEQDLRQPIVSVSLGLSAVFLFGGEKRSDPCRRLALMHGDVVVWGGPSRLYYHA---I 192

Query: 183 LPGSSSLVPGG----GRINLTLRR 202
           LP  +  +P G     R NLT R+
Sbjct: 193 LPLKNGPLPAGMSDAVRFNLTFRK 216