Pairwise Alignments

Query, 211 a.a., RNA polymerase sigma factor from Ralstonia sp. UNC404CL21Col

Subject, 196 a.a., RNA polymerase sigma factor, sigma-70 family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 95.9 bits (237), Expect = 4e-25
 Identities = 56/166 (33%), Positives = 90/166 (54%), Gaps = 4/166 (2%)

Query: 18  FAQAVLPHVDAAYNLARWLSGDAQDADDIVQEACLRAFRLFGGF-RGGDGRPWLLAIVRN 76
           F    +PH+D+ YN A  L+ D  DA D+VQ+  L+A+R    F +G + + WL  I++N
Sbjct: 18  FDHEFMPHIDSMYNFAFRLTFDEDDAKDLVQDTYLKAYRFINSFEQGTNAKAWLFRILKN 77

Query: 77  TWFSECARRKQAPAQPWDDDAAAGQAHDDSASYGIDPAALLARIDDVR--RVHVALAQLP 134
           ++ +E  ++ + P++  D        + DS  Y I     +  + D+    +  AL  L 
Sbjct: 78  SFINEYRKKSKQPSKV-DYQEVETYYNSDSVDYNITSDLRVDAVKDMLGDEISNALNSLA 136

Query: 135 VPYREVLVLRELEDLPYRDIAAVVDAPIGTVMSRLARARQQLARLL 180
           V +R V++L +LE   Y ++A ++D PIGTV SRL RAR  L   L
Sbjct: 137 VDFRTVIILCDLEGFTYEEMAKILDIPIGTVRSRLHRARNLLKEKL 182