Pairwise Alignments

Query, 330 a.a., TRAP transporter substrate-binding protein from Ralstonia sp. UNC404CL21Col

Subject, 322 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  296 bits (759), Expect = 4e-85
 Identities = 154/316 (48%), Positives = 211/316 (66%), Gaps = 3/316 (0%)

Query: 16  ALLAAFASGAAQARTFRVADVHG-DTYPTNMAVKFMGDEIKKATDGKDSVKVFGNSALGS 74
           AL     + + QA   R ADVH  D YPT  AV+ M   + + + GK  +KVF  SALGS
Sbjct: 9   ALAVGLLALSTQAAELRSADVHNSDDYPTVAAVRHMSQLLDQRSGGKYKIKVFNKSALGS 68

Query: 75  EKDTIDQVRIGAIDMVRANGAAFNEIVPESVIPSLPFLFRDIEHFRKVMYGPVGQKILDA 134
           EK+T+DQV+IGA+DM R N ++ N I P+S++P++PFLFR  EH R V+ GP+G++IL  
Sbjct: 69  EKETLDQVKIGALDMNRVNISSLNAICPKSLVPTMPFLFRSTEHMRAVLDGPIGEEILKG 128

Query: 135 FSAKGFVALTFYESGARSIYAKKAIHTPADMKGVKIRVQPSDLMVDEIKAMGGTPTPMPF 194
              +G V L FY+SGARSIYAKK + + AD+KG+KIRVQ SDL V    AMG   TPM  
Sbjct: 129 CEHQGLVGLAFYDSGARSIYAKKPVRSLADVKGMKIRVQQSDLWVAVATAMGANATPMAT 188

Query: 195 SEVYTGLKTGLVDAAENNIPSYEETKHFEVAQIYSETQHAMTPEVLVFSKKIWDTLTPQE 254
           +EVYTGLKTG++DAAENN PSYE  KH+E  ++YS TQH+M PE+LV SK ++D ++P +
Sbjct: 189 AEVYTGLKTGVIDAAENNEPSYEGFKHYEAVKVYSYTQHSMAPEMLVISKAVFDKMSPAD 248

Query: 255 QAAIRKAAADSVPYYVKLWTAREQAATATVTKGNATIVPASQVDRAAFVKAMQPLWTKYE 314
           QA  R AA +SV +  + W  +   A   VTK  + +V    V++A F  AM+P++ K+ 
Sbjct: 249 QALFRAAAKESVTFQRQKWDEQTAKAIDIVTKAGSEMV--KDVNKAEFQTAMKPVYDKFM 306

Query: 315 TTPQMKDIVNAIVATK 330
           TTP ++ +V A+   K
Sbjct: 307 TTPDLQRLVKAVQDAK 322