Pairwise Alignments

Query, 1079 a.a., error-prone DNA polymerase from Ralstonia sp. UNC404CL21Col

Subject, 1160 a.a., DNA polymerase III alpha subunit from Escherichia coli BL21

 Score =  333 bits (855), Expect = 3e-95
 Identities = 298/1079 (27%), Positives = 499/1079 (46%), Gaps = 72/1079 (6%)

Query: 11   PAYAELHCISNFTFLTGASHPYELVERAKLYGYQALALTDECSVAGTARALVASKEYELK 70
            P +  L   S+++ + G +    LV++A   G  ALA+TD  ++ G  +   A     +K
Sbjct: 4    PRFVHLRVHSDYSMIDGLAKTAPLVKKAAALGMPALAITDFTNLCGLVKFYGAGHGAGIK 63

Query: 71   LIIGSRFTVR-NADGEPWLRLVLLAQNIEGYGNLSEIITHARLAAPKGEYRLLADDLAAP 129
             I+G+ F V+ +  G+    L +LA N  GY NL+ +I+ A          ++  D    
Sbjct: 64   PIVGADFNVQCDLLGDELTHLTVLAANNTGYQNLTLLISKAYQRGYGAAGPIIDRDWLIE 123

Query: 130  KGE-LAHLRG--VPDCLAILLPDYDPDPQQLLAQAWWCQRVFGDRLSIALELPLRHADDR 186
              E L  L G  + D    LL        + +A   + +  F DR  + L    R  ++ 
Sbjct: 124  LNEGLILLSGGRMGDVGRSLLRGNSALVDECVA---FYEEHFPDRYFLELIRTGRPDEES 180

Query: 187  HRGTVGAVSEQIDVPMVATSGVQMHTRQRKPLHDVLTAIRLSKPLSECGLELAPSAEQAM 246
            +      ++E   +P+VAT+ V+         H++  AI     L +       S +Q M
Sbjct: 181  YLHAAVELAEARGLPVVATNDVRFIDSSDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYM 240

Query: 247  RTRVQLSYLYQGERGKRILRRTVELAALCNFSLDEIQYEYPSEVVPEG-MTPAEYLHAET 305
            R+  ++  L+        L  TVE+A  CN ++   +Y  P    P G M+  +YL    
Sbjct: 241  RSEEEMCELFADI--PEALANTVEIAKRCNVTVRLGEYFLPQ--FPTGDMSTEDYLVKRA 296

Query: 306  LAGAARR----YPNGVSEKVR------EQIQEELGLIAELGYEPFFLTVYDVVKFARNEG 355
              G   R    +P+   E+V+      E+++ EL +I ++G+  +FL V + ++++++ G
Sbjct: 297  KEGLEERLAFLFPDE-EERVKRRPEYDERLETELQVINQMGFPGYFLIVMEFIQWSKDNG 355

Query: 356  I-LCQGRGSAANSAVCYCLGITEVNPDSGNTLFARFLSRARNEPPDIDVDFEHQRREEVI 414
            + +  GRGS A S V Y L IT+++P   + LF RFL+  R   PD DVDF  ++R++VI
Sbjct: 356  VPVGPGRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVI 415

Query: 415  QYIYKKYGVTRTALAAALITYRTRSALRDVGRALGIDLGIIEQVAK------GQAWWDSR 468
            +++   YG    +      T   ++ +RDVGR LG   G +++++K      G     + 
Sbjct: 416  EHVADMYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPDPGMTLAKAF 475

Query: 469  KEFVQRAGQQGLDPESPLVLRWAQLVDQLRGFPRHLSQHVGGFVIAQGKLSRLVPIENAA 528
            +   Q       D E   ++  A+   +L G  R+  +H GG VIA  K++   P+    
Sbjct: 476  EAEPQLPEIYEADEEVKALIDMAR---KLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDE 532

Query: 529  MENRRVIQWDKDDLESLRLLKVDVLALGMLTAIRRTLDMVDALPGRREHYGATTKLAMQN 588
                 V Q+DK D+E   L+K D L L  LT I   L+M++    +R        L +  
Sbjct: 533  EGKHPVTQFDKSDVEYAGLVKFDFLGLRTLTIINWALEMIN----KRRAKNGEPPLDIAA 588

Query: 589  LHDGDKKTYDMICRAETIGVFQIESRAQQSMLPRLRPREYYDLVIQVAIVRPGPIQGGMV 648
            +   DKK++DM+ R+ET  VFQ+ESR  + ++ RL+P  + D++  VA+ RPGP+Q GMV
Sbjct: 589  IPLDDKKSFDMLQRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMV 648

Query: 649  HPYLQRREAKRNGNTDCVTYPGPEVKAVLERTLGVPIFQEQVMEIAMKAGDFTPDDADRL 708
              ++ R+  +   +   V +    +K VLE T G+ ++QEQVM+IA     +T   AD L
Sbjct: 649  DNFIDRKHGREEISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADML 708

Query: 709  RRDMAAWKRKGNLTQHQERLVHAMVEKRGYDPAFVEALCKQMEGFAEYGFPESHAAGFAK 768
            RR M   K+K      Q  +     EK G +      +   +E FA YGF +SH+A +A 
Sbjct: 709  RRAMG--KKKPEEMAKQRSVFAEGAEKNGINAELAMKIFDLVEKFAGYGFNKSHSAAYAL 766

Query: 769  LAYVSSFLKCHEPAAFFAALLNSQPMGFYSPSQLVQEARRSHVRVLPADVTASVWDSTLH 828
            ++Y + +LK H PA F AA++ +          LV E  R  +++LP D+ + ++    H
Sbjct: 767  VSYQTLWLKAHYPAEFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYH--FH 824

Query: 829  LRADGEVGENGLVQPDIRLGLNRIRGMRK-PAAERIEAARAQAPFTSVEDLAHRA---AL 884
            +  DGE          I  G+  I+G+ + P    IEA      F  + DL  R     L
Sbjct: 825  VNDDGE----------IVYGIGAIKGVGEGPIEAIIEARNKGGYFRELFDLCARTDTKKL 874

Query: 885  DRHDLNVLAAANALKSLAGHR---RQALWQTLALQEPGHDHALLRQARPVEAPLELP--- 938
            +R  L  L  + A   L  HR     +L   L   +       + QA       E P   
Sbjct: 875  NRRVLEKLIMSGAFDRLGPHRAALMNSLGDALKAADQHAKAEAIGQADMFGVLAEEPEQI 934

Query: 939  ------APPIGEEVMAD--YGSLGLSLQSHPLRLLRARLER-MRFATAATLAGYRNGQLA 989
                    P  E+V+ D    +LGL L  HP+      +ER +       +     G++ 
Sbjct: 935  EQSYASCQPWPEQVVLDGERETLGLYLTGHPINQYLKEIERYVGGVRLKDMHPTERGKVI 994

Query: 990  RACGIVTVRQRPGTANGTI--FVSIEDETGAINVILWPHLIERQRREVLNAQLLGVYGK 1046
             A G+V   +   T  G      +++D +G + V+L+   +++ ++ +   ++L V G+
Sbjct: 995  TAAGLVVAARVMVTKRGNRIGICTLDDRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQ 1053