Pairwise Alignments

Query, 1079 a.a., error-prone DNA polymerase from Ralstonia sp. UNC404CL21Col

Subject, 1091 a.a., DNA polymerase III subunit alpha from Agrobacterium fabrum C58

 Score =  775 bits (2002), Expect = 0.0
 Identities = 459/1080 (42%), Positives = 638/1080 (59%), Gaps = 50/1080 (4%)

Query: 11   PAYAELHCISNFTFLTGASHPYELVERAKLYGYQALALTDECSVAGTARALVASKEYELK 70
            P YAEL   ++F+FL GAS   EL E+AK  G +AL + D  S+A   RA  A+  + ++
Sbjct: 4    PRYAELQVTTHFSFLRGASSCDELFEQAKNLGIEALGVVDRNSLAAIPRAYEAANNHGVR 63

Query: 71   LIIGSRFTVRNADGEPWLRLVLLAQNIEGYGNLSEIITHARLAAPKGEYRLLADDLAAPK 130
            L+IG R      D +  L +++   +   YG L  +++  +    KG+ RL  DDL A  
Sbjct: 64   LVIGCRL-----DLDDDLSVLVYPMDRAAYGRLCRLLSVGKKRGGKGKCRLSWDDLVA-Y 117

Query: 131  GELAHLRGVPDCLAILLPDYDPDPQQLLAQAWWCQRVFGDRLSIALELPLRHADDRHRGT 190
            GE          + +LL D   D   L  +    +  F DR  +AL L  R  D      
Sbjct: 118  GE--------GLIVVLLADLADDLCALRLRR--LKAAFADRAYMALSLRRRPNDQMRLFE 167

Query: 191  VGAVSEQIDVPMVATSGVQMHTRQRKPLHDVLTAIRLSKPLSECGLELAPSAEQAMRTRV 250
            +  +++   VP V T+ V  H  +R+ L DV+T IR +  + E G      A++ M+   
Sbjct: 168  LSGMAQAAGVPTVVTNDVLFHVPERRMLQDVVTCIRHNCTIDEAGFRRERHADRYMKPPE 227

Query: 251  QLSYLYQGERGKRILRRTVELAALCNFSLDEIQYEYPSEVVPEGMTPAEYLHAETLAGAA 310
            ++  L+   R    L R++E+A  C FSL E+ Y+YP E    G+T  + L         
Sbjct: 228  EMHRLFA--RYPEALSRSLEIAKRCKFSLKELVYQYPEERSLPGLTAQQALEKMVWEAVP 285

Query: 311  RRYPNGVSEKVREQIQEELGLIAELGYEPFFLTVYDVVKFARNEGILCQGRGSAANSAVC 370
             RYPNG+ EKV + +  EL ++  L Y  +FLTV  +V++AR++ ILCQGRGSAANS +C
Sbjct: 286  GRYPNGLPEKVEKALHHELDVVGRLQYASYFLTVNAIVRYARSKDILCQGRGSAANSVIC 345

Query: 371  YCLGITEVNPDS-GNTLFARFLSRARNEPPDIDVDFEHQRREEVIQYIYKKYGVTRTALA 429
            + LGIT ++P    N +F RF+S  R EPPDIDVDFEHQRREEVIQ++Y  YG  + AL 
Sbjct: 346  FVLGITAIDPALFSNLVFERFVSENRGEPPDIDVDFEHQRREEVIQWVYDTYGRDKAALC 405

Query: 430  AALITYRTRSALRDVGRALGIDLGIIEQVAKGQAWWDSRKEFVQRAGQQGLDPESPLVLR 489
            + +  YR R ALRDVG+ LG+   + + ++  Q W  S     ++  +  L+ E   +  
Sbjct: 406  SVVTRYRGRGALRDVGKVLGLPEDLTKLLSS-QVWRWSEGVGEKQVKELNLNMEDRRLKL 464

Query: 490  WAQLVDQLRGFPRHLSQHVGGFVIAQGKLSRLVPIENAAMENRRVIQWDKDDLESLRLLK 549
              +L +QL G PRH SQH GGFV++  +L  LVPIE AAM +R++I+WDKDD++ ++ +K
Sbjct: 465  AFELANQLVGTPRHHSQHPGGFVLSHDRLDELVPIEPAAMNDRQIIEWDKDDIDIVKFMK 524

Query: 550  VDVLALGMLTAIRRTLDMVDALPGRREHYGATTKLAMQNLHDGDKKTYDMICRAETIGVF 609
            +D LALGML+ ++R  D+++A  G +    A        +   D  T+ MI +A+T+G F
Sbjct: 525  MDCLALGMLSCMKRGFDLLEARTGEKYDLAA--------MPPDDPATFAMIQKADTLGTF 576

Query: 610  QIESRAQQSMLPRLRPREYYDLVIQVAIVRPGPIQGGMVHPYLQRREAKRNGNTDCVTYP 669
            QIESRAQ SMLPRL+P ++YDLVIQVAIVRPGPIQG MVHPYL+RR+ K     + V Y 
Sbjct: 577  QIESRAQMSMLPRLKPAKFYDLVIQVAIVRPGPIQGDMVHPYLRRRQGK-----EPVLYE 631

Query: 670  GPEVKAVLERTLGVPIFQEQVMEIAMKAGDFTPDDADRLRRDMAAWKRKGNLTQHQERLV 729
             P+++ +L++TLGVP+FQEQ M IAM   DFT D+AD+LRR MA +K  G +++ +E+LV
Sbjct: 632  KPQLENILKKTLGVPLFQEQAMRIAMDCADFTADEADQLRRAMATFKNVGTISKFKEKLV 691

Query: 730  HAMVEKRGYDPAFVEALCKQMEGFAEYGFPESHAAGFAKLAYVSSFLKCHEPAAFFAALL 789
              MV   GYD  F E + KQ+EGF  YGFPESHAA FA +AY SS+LKCH P  F  A+L
Sbjct: 692  TGMVAN-GYDKEFAERIFKQLEGFGSYGFPESHAASFALIAYASSWLKCHHPDIFCTAIL 750

Query: 790  NSQPMGFYSPSQLVQEARRSHVRVLPADVTASVWDSTLHLRADGEVGENGLVQPDIRLGL 849
            NSQPMGFY+P+Q+V++AR   V V P  V  S +D TL     G+  + G  +  +RLGL
Sbjct: 751  NSQPMGFYAPAQIVRDARDHGVEVRPVCVNNSRFDCTLE--PTGKKNDKGEERFAVRLGL 808

Query: 850  NRIRGMRKPAAERIEAARAQAPFTSVEDLAHRAALDRHDLNVLAAANA-LKSLAGHRRQA 908
              ++G+    A  I AAR   PF SV+DL  RA +    L  LA A+A L SL   RR+A
Sbjct: 809  RMVKGLSNDHAADIVAARQDRPFASVDDLWRRAGVPAAALVCLAEADAFLPSLRLARREA 868

Query: 909  LWQTLALQE---PGHDHALLRQARPVEAPLELPAPPI-------GEEVMADYGSLGLSLQ 958
            LW   AL++   P    A +R+   +E   EL  P +       G EV+ DYG +GL+L+
Sbjct: 869  LWAIKALRDEPLPLFAAAAIRENAVIE---ELQEPSVALRPMTDGGEVVQDYGHVGLTLR 925

Query: 959  SHPLRLLRARLERMRFATAATLAGYRNGQLARACGIVTVRQRPGTANGTIFVSIEDETGA 1018
             HP+  LR  L R R  T A     R+G      G+V VRQRPG+A G IF+++EDETG 
Sbjct: 926  EHPMTFLRRDLSRRRIVTCAEAVRVRDGTWLETAGLVLVRQRPGSAKGVIFMTLEDETGI 985

Query: 1019 INVILWPHLIERQRREVLNAQLLGVYGKWQCERETRHLVAQHLVDLTPLLGRLATSSRDF 1078
             N +LW    E+ RR VL+A ++G+YGK Q E E  HLVA  L DL+  L  +   +  F
Sbjct: 986  ANAVLWVKTFEKYRRVVLSAGMVGIYGKIQREGEVVHLVAHRLTDLSHALASVGERNNAF 1045