Pairwise Alignments

Query, 937 a.a., DNA polymerase I from Ralstonia sp. UNC404CL21Col

Subject, 928 a.a., DNA polymerase I (EC 2.7.7.7) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  942 bits (2436), Expect = 0.0
 Identities = 501/941 (53%), Positives = 642/941 (68%), Gaps = 26/941 (2%)

Query: 5   QETLLLVDGSSYLYRAYHALPDLRNGEGFPTGAIYGIVNMLRKLRNDYPAKYSACIFDAK 64
           +  L+LVDGSSYLYRAYHA P L N  G PTGA+YG++NMLR L   Y   ++A +FDAK
Sbjct: 6   ENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYQPTHAAVVFDAK 65

Query: 65  GKTFRDDLYPAYKEHRAPMPDDLRAQIEPIHEAVRALGWPILVIEGVEADDVIGTLAERA 124
           GKTFRD+L+  YK HR PMPDDLRAQIEP+H  V+A+G P+L + GVEADDVIGTLA  A
Sbjct: 66  GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125

Query: 125 AREGVRTIVSTGDKDLAQLVNDHVTLVNTMTNETLDPAGVQAKFGVPPERIVDYLSLIGD 184
            + G   ++STGDKD+AQLV  ++TL+NTMTN  L P  V  K+GVPPE I+D+L+L+GD
Sbjct: 126 EKVGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPDEVVNKYGVPPELIIDFLALMGD 185

Query: 185 TVDNVPGVPKVGPKTAVKWLTEFGSLDNVIARAGEIKGVVGDNLRNTLEWLPKGRE---- 240
           + DN+PGVP VG KTA   L   G LD + A   +I G+     +     L + ++    
Sbjct: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLTFRGAKTMAGKLAQNKDVAYL 245

Query: 241 ---LLTVKLDCDLSKEVPTFDALIDGGEDKSKLVDFFSRYGFKTWLREASGDALPDTRSV 297
              L T+K D +L     T + L        +L+  F +Y FK W  +         +  
Sbjct: 246 SYKLATIKTDVELEL---TCEQLEVQQPIADELLGLFKKYEFKRWTADVESGKWLQAKG- 301

Query: 298 GAARRAATPVKNYAGEAAQLQAQANLFDVEAPPDEIQYETVTTEAQLESWMQRLDEVDLV 357
             A+ AA P +    + +  +  A L           Y T+  +  LESW+++L +  + 
Sbjct: 302 --AKPAAKPQETVVIDESPSEPAAAL-------SYENYVTILDDVTLESWIEKLKKAPVF 352

Query: 358 CIDTETTSIDPMLAQLVGISLSVKPGEACYIPVAHRGPDVAGLDAAAQLSRDTVLARMKL 417
             DTET S+D + A LVG+S +++PG A Y+PVAH       LDA  Q+SR   L  +K 
Sbjct: 353 AFDTETDSLDNIAANLVGLSFAIEPGVAAYVPVAHDY-----LDAPDQISRQRALELLKP 407

Query: 418 WLEDESRKKVGQHLKYDAHVLANHGIALRGIEHDTMLESYVLESHRN-HGMDALAERVLH 476
            LEDE  +KVGQ+LKYD  VL N+GI LRGI  DTMLESY+L S    H MD+L++R L 
Sbjct: 408 LLEDEKVRKVGQNLKYDRGVLQNYGIELRGIAFDTMLESYILNSVAGRHDMDSLSDRWLK 467

Query: 477 LKTITYESVCGKGASQIGFDEVPLDRATEYAAEDADITLRLHRTLFPKVSEDDKLRYVYE 536
            KTIT+E + GKG +Q+ F+++ L+ A  YAAEDAD+TL+LH  ++P++ +      V+E
Sbjct: 468 HKTITFEDIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPELQQHKGPLNVFE 527

Query: 537 QIEMPTSIVLQKMERNGVLIDAERLAKQSNELGLRLIDLEAEAHKLAGQPFNLGSPKQIG 596
            IEMP   VL ++ERNGV ID   L K S E+ LRL +LE +AH +AG+ FNL S KQ+ 
Sbjct: 528 NIEMPLVPVLSRVERNGVKIDPAVLHKHSEEITLRLAELEKKAHDIAGEAFNLSSTKQLQ 587

Query: 597 DIFFNQMKLPIIKKTASGAPSTDEEVLQKLAEDYPLPKLLLDYRGLAKLKSTYTDKLPKM 656
            I F +  +  +KKT  GAPST EEVL++LA DYPLPK++L+YRGLAKLKSTYTDKLP M
Sbjct: 588 TILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLM 647

Query: 657 VNPRTGRVHTTYGQATAVTGRLASTDPNLQNIPVRTEEGRRIREAFIAPEGSVIVSADYS 716
           +NP+TGRVHT+Y QA   TGRL+STDPNLQNIPVR EEGRRIR+AFIAPE  +IVSADYS
Sbjct: 648 INPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYLIVSADYS 707

Query: 717 QIELRIMAHLSQDEGLMRAFREGQDVHRATAAEVFNVTPLEVTPDQRRVAKVINFGLIYG 776
           QIELRIMAHLS+D+GL+ AF EG+D+HRATAAEVF +    VT +QRR AK INFGLIYG
Sbjct: 708 QIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLDSVTGEQRRSAKAINFGLIYG 767

Query: 777 MSAFGLASNLGIGRDAAKLYIDRYFARYPGAASYMDETRQSARERGYVETVFGRRLWLPD 836
           MSAFGL+  L I R  A+ Y+D YF RYPG   YM+ TR  A+E+GYVET+ GRRL+LPD
Sbjct: 768 MSAFGLSRQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLEGRRLYLPD 827

Query: 837 INGGNGPRRQAAERAAINAPMQGTAADLIKLSMLAVQGWLEAEAMRSRLVMQVHDELVLE 896
           I   N  RR  AERAAINAPMQGTAAD+IK +M+AV  WL+AE  R R++MQVHDELV E
Sbjct: 828 IKSSNAARRAGAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFE 887

Query: 897 VPQDELAVVRERLPELMCSVATLRVPLVAEVGVGANWEEAH 937
           V +D+L  V +R+ +LM +   + VPL+ EVG G NW++AH
Sbjct: 888 VHKDDLDAVAKRIHQLMENCTRIDVPLLVEVGSGENWDQAH 928