Pairwise Alignments

Query, 188 a.a., RNA polymerase sigma factor from Ralstonia sp. UNC404CL21Col

Subject, 193 a.a., RNA polymerase sigma-H factor from Pseudomonas simiae WCS417

 Score = 50.4 bits (119), Expect = 2e-11
 Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 12/158 (7%)

Query: 26  VRDDDAALDIVQDAMIKLAEKYGDKPGAELPLLFQRILQNTIHDWFRRSKVRNTWVSLFS 85
           V D   A D+ Q+A IK     G+  G            +  + W  R  +      L S
Sbjct: 41  VHDTHEAQDVAQEAFIKAYRALGNFRG-----------DSAFYTWLYRIAINTAKNYLVS 89

Query: 86  SFRTDAEGD-DTDPLELIESEAGTTAAESSADKVERSQMLEILEREIEKLPTRQREAFLM 144
             R   + D  ++  E  + + G    ES    + R ++   + R I++LP   R A  +
Sbjct: 90  RGRRPPDSDVSSEDAEFYDGDHGLKDLESPERALLRDEIEGTVHRTIQQLPEDLRTALTL 149

Query: 145 RYWEDMDVAETAQAMGCSEGSVKTHCSRATHALAQALR 182
           R ++ +   + A  M C  G+V++   RA  A+ +AL+
Sbjct: 150 REFDGLSYEDIASVMQCPVGTVRSRIFRAREAIDKALQ 187