Pairwise Alignments

Query, 188 a.a., RNA polymerase sigma factor from Ralstonia sp. UNC404CL21Col

Subject, 179 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

 Score = 53.9 bits (128), Expect = 2e-12
 Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 19/150 (12%)

Query: 27  RDDDA--ALDIVQDAMIKLAEKYGDKPGAELPLLFQ-RILQNTIHDWFRRSKVRNTWVSL 83
           R D+A  A D+ QD   +  + Y D+   E P  F  ++ +N + D +R+ KVR+T    
Sbjct: 28  RTDNASDAADMTQDVFTQWLD-YRDRAKVEQPRAFLFQMARNLLRDHWRKQKVRHT---- 82

Query: 84  FSSFRTDAEGDDTDPLELIESEAGTTAAESSADKVERSQMLEILEREIEKLPTRQREAFL 143
                     D  D    +++E  T         V+R Q LE L+  + +L  R+REA +
Sbjct: 83  -------VHSDQAD----MDAEPATDEQNDPMAAVQRLQRLEQLKEVLAELSPRRREALM 131

Query: 144 MRYWEDMDVAETAQAMGCSEGSVKTHCSRA 173
           +  +E +  A+ A+ MG S   V+ H + A
Sbjct: 132 LHRFEGLSQAQIAERMGISTSMVEKHIAFA 161