Pairwise Alignments

Query, 188 a.a., RNA polymerase sigma factor from Ralstonia sp. UNC404CL21Col

Subject, 196 a.a., RNA polymerase ECF-type sigma factor from Variovorax sp. SCN45

 Score = 49.7 bits (117), Expect = 3e-11
 Identities = 45/159 (28%), Positives = 70/159 (44%), Gaps = 12/159 (7%)

Query: 25  AVRDDDAALDIVQD--AMIKLAEKYGDKPGAELPLLFQRILQNTIHDWFRRSKVRNTWVS 82
           +V+D   A D+VQ+  A + +A+K G+       LL+ R  +N + D  R  +VR   + 
Sbjct: 16  SVKDQHTAADLVQESYARVLVAQKNGEDIVDPRALLY-RTARNLLIDRHRHDQVRRAALG 74

Query: 83  LFSSFRTDAEGDDTDPLELIESEAGTTAAESSADKVERSQMLEILEREIEKLPTRQREAF 142
                    E  DTD  E   S+     A      V   Q ++ L   I +LP R R+AF
Sbjct: 75  ---------ETVDTDEDEETLSQLAAPPAFEPEVAVASRQGVQALLTTIGELPVRCRQAF 125

Query: 143 LMRYWEDMDVAETAQAMGCSEGSVKTHCSRATHALAQAL 181
           ++  +E +  AE A+ MG +   V+ H      A    L
Sbjct: 126 MLHKFEGLSHAEVAEEMGITVKMVEKHIKMGLQACRACL 164