Pairwise Alignments

Query, 269 a.a., exodeoxyribonuclease III from Ralstonia sp. UNC404CL21Col

Subject, 265 a.a., putative Exodeoxyribonuclease III from Pseudomonas putida KT2440

 Score =  189 bits (480), Expect = 5e-53
 Identities = 102/264 (38%), Positives = 153/264 (57%), Gaps = 15/264 (5%)

Query: 1   MRVATWNVNSLKVRLPHVLQWLAQREADATPIDLLCLQELKLPDDRYPLAELDAAGYSSL 60
           +++AT+N+N ++ RLP +L WL + + D     + CLQELK  D ++P AEL+AAGY SL
Sbjct: 4   LKIATFNINGIRSRLPALLAWLEREQPD-----IACLQELKAADQQFPRAELEAAGYGSL 58

Query: 61  FTGQKTYNGVAILARKASVPEGRDVVKNIPGFDDEQQR--IVAATYDVDGGPVRVISAYI 118
             GQ ++NGVAIL R +   E R   + +PG +++ Q   + AA + V      V   Y+
Sbjct: 59  HHGQPSWNGVAILVRGSDPLEVR---RGLPGLEEDSQSRYLEAAAHGV-----LVACLYL 110

Query: 119 PNGQALDSDKFVYKLRWLEALQAWLTSELAANPRLMLLGDFNIAPEDRDVHDPKKWEGQN 178
           PNG  L   KF YKL W E L     S   +    +L GDFN+ P D D+++P+ W    
Sbjct: 111 PNGNPLPGPKFDYKLHWFECLIQHARSLQESGHPTLLAGDFNVVPTDMDIYNPRSWLKDA 170

Query: 179 LVSPEERAAFRAMQGAGLVDAFRMFEQEDKLFSWWDYRMFGFKRNAGLRIDHIMLSPELA 238
           L+ PE RA ++ +   G +DA R    +++++++WDY    + RNAGLRIDH++L+ ELA
Sbjct: 171 LLQPESRACYQRLLDQGWLDAIRHLYPDERVYTFWDYFRNHWARNAGLRIDHLLLNRELA 230

Query: 239 KLCESCHIDRVPRTWDQPSDHTPV 262
              +   +D   R   + SDH PV
Sbjct: 231 PYLKRAGVDAWVRNQAKASDHAPV 254