Pairwise Alignments

Query, 456 a.a., DNA repair protein RadA from Ralstonia sp. UNC404CL21Col

Subject, 460 a.a., predicted repair protein (NCBI) from Escherichia coli BW25113

 Score =  512 bits (1318), Expect = e-149
 Identities = 261/454 (57%), Positives = 337/454 (74%), Gaps = 6/454 (1%)

Query: 1   MAKS-KTVYTCTECGGTAPKWAGQCPNCQQWNTLVET--VAQPTSGAGARFQSLASSA-- 55
           MAK+ K  + C ECG   P+W GQC  C  WNT+ E    A P      R    A SA  
Sbjct: 1   MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPMVARNERLSGYAGSAGV 60

Query: 56  -TVRKLSDIDAVDVPRFSSGIDEFDRVLGGGLVSGGVVLIGGDPGIGKSTLLLQALSNLS 114
             V+KLSDI   ++PRFS+G  EFDRVLGGG+V G  +LIGG+PG GKSTLLLQ L  L+
Sbjct: 61  AKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLA 120

Query: 115 TDRRVLYVSGEESGSQIALRARRLGIESPNLALLAEIQLERIQATIEAEKPEVVVIDSIQ 174
              + LYV+GEES  Q+A+RA RLG+ + NL +L+E  +E+I    E E+P+++VIDSIQ
Sbjct: 121 QQMKTLYVTGEESLQQVAMRAHRLGLPTDNLNMLSETSIEQICLIAEEEQPKLMVIDSIQ 180

Query: 175 TLYSEALTSAPGSVAQVRECAAQLTRIAKRLDVTTILVGHVTKEGALAGPRVLEHIVDTV 234
            ++   + S+PGSVAQVRE AA LTR AK   V  ++VGHVTK+G+LAGP+VLEH +D  
Sbjct: 181 VMHMADVQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS 240

Query: 235 LYFEGDTHSAYRLVRAFKNRFGAVNELGVFAMTERGLRGVANPSALFLSQHEQVVPGSCV 294
           +  +GD  S +R +R+ KNRFGAVNELGVFAMTE+GLR V+NPSA+FLS+ ++V  GS V
Sbjct: 241 VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSSV 300

Query: 295 LVTQEGTRPLLVEIQALVDTANVPNPRRLAVGLEQNRLAMLLAVLHRHAGIACFDQDVFL 354
           +V  EGTRPLLVEIQALVD + + NPRR+AVGLEQNRLA+LLAVLHRH G+   DQDVF+
Sbjct: 301 MVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFV 360

Query: 355 NAVGGVKITEPAADLAVLLAIHSSMRNKALPRGLVVFGEIGLAGEIRPTPRGQERLKEAA 414
           N VGGVK+TE +ADLA+LLA+ SS+R++ LP+ LVVFGE+GLAGEIRP P GQER+ EAA
Sbjct: 361 NVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEAA 420

Query: 415 KLGFSIAVIPKSNVPKQAIDGLEVIAVERIEQAI 448
           K GF  A++P +NVPK+A +G+++  V+++  A+
Sbjct: 421 KHGFRRAIVPAANVPKKAPEGMQIFGVKKLSDAL 454