Pairwise Alignments

Query, 696 a.a., excinuclease ABC subunit UvrB from Ralstonia sp. UNC404CL21Col

Subject, 988 a.a., excinuclease ABC subunit B from Agrobacterium fabrum C58

 Score =  778 bits (2010), Expect = 0.0
 Identities = 398/676 (58%), Positives = 494/676 (73%), Gaps = 3/676 (0%)

Query: 9   SPHDESKFVTFEGS-PFQLYQPYPPAGDQPEAIRQLVENIEDGLSYQTLLGVTGSGKTFT 67
           +PH  ++    EG    ++   Y PAGDQP AI  LVE I  G   Q LLGVTGSGKTFT
Sbjct: 155 TPHRPARPPKSEGGVTIRMDSEYQPAGDQPTAIADLVEGINSGERSQVLLGVTGSGKTFT 214

Query: 68  MANVIAQVGRPAIVFAPNKTLAAQLYSEFREFFPRNAVEYFVSYYDYYQPEAYVPQRDLF 127
           MA VI    RPA++ APNKTLAAQLYSEF+ FFP NAVEYFVSYYDYYQPEAYVP+ D F
Sbjct: 215 MAKVIEATQRPAVILAPNKTLAAQLYSEFKNFFPDNAVEYFVSYYDYYQPEAYVPRSDTF 274

Query: 128 IEKDSSINEHIEQMRLSATKSLLERRDVVIVATVSAIYGIGNPSEYHQMILTLRAGDKVS 187
           IEK+SSINE I++MR SAT+SLLER D +IVA+VS IYGIG+   Y  M   ++ GD++ 
Sbjct: 275 IEKESSINEQIDRMRHSATRSLLERDDCIIVASVSCIYGIGSVETYTAMTFQMQVGDRLD 334

Query: 188 QRDVIARLIAMQYTRNETDFQRGTFRVRGDTVDIFPAEHAEMAVRLELFDDEVESLQLFD 247
           QR ++A L+A QY R + DFQRG+FRVRGDT++IFPA   + A R+ +F DE++S+  FD
Sbjct: 335 QRQLLADLVAQQYKRRDMDFQRGSFRVRGDTIEIFPAHLEDAAWRISMFGDEIDSITEFD 394

Query: 248 PLTGRVRQKIPRFTVYPSSHYVTPRETVLRAIETIKAELRERLDFFYKENKLVEAQRLEQ 307
           PLTG+    +    +Y +SHYVTPR T+  AI++IK EL+ RL    K  +L+EAQRLEQ
Sbjct: 395 PLTGQKTGDLQSVKIYANSHYVTPRPTLNGAIKSIKEELKVRLAELEKAGRLLEAQRLEQ 454

Query: 308 RTRFDLEMLQELGFCKGIENYSRHLSGSAPGEPPPTLVDYLPPDALMFLDESHVLIGQLN 367
           RTR+D+EML+  G C GIENYSR+L+G  PGEPPPTL +Y+P +AL+F+DESHV + Q+ 
Sbjct: 455 RTRYDIEMLEATGSCAGIENYSRYLTGRNPGEPPPTLFEYIPDNALLFIDESHVSVSQIG 514

Query: 368 GMYNGDRARKETLAEYGFRLPSALDNRPLKFAEFETKMRQVTFVSATPGDYEKKTAGTEV 427
           GMY GD  RK TLAEYGFRLPS +DNRPL+F E++        VSATPG +E + +G   
Sbjct: 515 GMYRGDFRRKATLAEYGFRLPSCMDNRPLRFEEWDAMRPLTVAVSATPGSWEMEQSGGVF 574

Query: 428 VEQVVRPTGLVDPIIEVRPATTQVDDLLSEIHVRVEAGERVLVTTLTKRMAEQLTEFLSE 487
            EQV+RPTGL+DP +EVR A +QVDD+L EI      G R L T LTKRMAE LTE+L E
Sbjct: 575 AEQVIRPTGLIDPPVEVRSARSQVDDVLGEIRETAAKGYRTLCTVLTKRMAEDLTEYLHE 634

Query: 488 NGIKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAILDADKEGF 547
            G++VRY+HSDIDT+ER+EIIRDLRLG FDVLVGINLLREGLDIPE   VAILDADKEGF
Sbjct: 635 QGVRVRYMHSDIDTLERIEIIRDLRLGAFDVLVGINLLREGLDIPECGFVAILDADKEGF 694

Query: 548 LRAERSLIQTIGRAARNVNGTAILYADRMTDSMKKAIDETERRRAKQIAHNEAHGITPRG 607
           LR+E SLIQTIGRAARNV+G  ILYAD +T SMK+A++ET RRR KQ+A+N  HGITP  
Sbjct: 695 LRSETSLIQTIGRAARNVDGKVILYADNITGSMKRAMEETSRRREKQMAYNAEHGITPES 754

Query: 608 VVKRIKDIIDGVYNVDDARAELK--AAQEAAKYEDMSEKQASKEIKRLEKQMLDHAKNLE 665
           V  +I DI+D VY  D  RA++   + +  A    +        +  LEK M D A +L+
Sbjct: 755 VKAKISDILDSVYERDHVRADISGVSGKGFADGGHLVGNNLQAHLNALEKSMRDAAADLD 814

Query: 666 FEKAAAVRDQLAKLKS 681
           FEKAA +RD++ +LK+
Sbjct: 815 FEKAARLRDEIKRLKA 830