Pairwise Alignments

Query, 328 a.a., cytochrome d ubiquinol oxidase subunit II from Paraburkholderia bryophila 376MFSha3.1

Subject, 378 a.a., cytochrome bd-II oxidase, subunit II from Escherichia coli BL21

 Score =  130 bits (326), Expect = 7e-35
 Identities = 105/365 (28%), Positives = 168/365 (46%), Gaps = 53/365 (14%)

Query: 8   DLLNHAWFGLIGLMLLLYVVTDGFDLGVGILTLLRSREAD-RDLMIQSIGHVWDANETWL 66
           + L   W+ LIG++L++++++DGFD+G+G L  L +R  D R ++I S+G  W+ N+ WL
Sbjct: 5   ETLRFIWWLLIGVILVVFMISDGFDMGIGCLLPLVARNDDERRIVINSVGAHWEGNQVWL 64

Query: 67  VALGGALFGAFPQAYAMILSDLYVPVMVLIASFIMRGAAIEFRH--AAHTSKTAWDRVFG 124
           +  GGALF A+P+ YA   S  YV +++++ S   R  A ++R   A    +  WD    
Sbjct: 65  ILAGGALFAAWPRVYAAAFSGFYVAMILVLCSLFFRPLAFDYRGKIADARWRKMWDAGLV 124

Query: 125 LGSLLAAVSQGIVLGKLLTG----FVPGL----------ANTGFVAITAVGVVSGYCLLG 170
           +GSL+  V  GI  G LL G    F P L            T F  +  +  +    L G
Sbjct: 125 IGSLVPPVVFGIAFGNLLLGVPFAFTPQLRVEYLGSFWQLLTPFPLLCGLLSLGMVILQG 184

Query: 171 ATWLVKKTTGSM----ESSSRRQAIIAVFTTVIAAL-----IVSFGTLKQSPVG------ 215
             WL  KT G +    + +++R A++ +   ++A       I  F  L Q   G      
Sbjct: 185 GVWLQLKTVGVIHLRSQLATKRAALLVMLCFLLAGYWLWVGIDGFVLLAQDANGPSNPLM 244

Query: 216 ----------ITRWQEHGVFHLLIALAVLAALAFVYVLYSVHMRGEHGPFFGATLLFMFS 265
                     +  + E  V  +   L     L  V  +Y    RG  G  F    L  F 
Sbjct: 245 KLVAVLPGAWMNNFVESPVLWIFPLLGFFCPLLTVMAIY----RGRPGWGFLMASLMQFG 300

Query: 266 FAGLA-ISLFPYIVP------GQLTVAEAASDSATLTFMLFGIGIVFPIMVGYNLYQYHL 318
               A I+LFP+++P        LT+ ++ S   TL+ ML  + I  PI++ Y L+ Y+ 
Sbjct: 301 VIFTAGITLFPFVMPSSVSPISSLTLWDSTSSQLTLSIMLVIVLIFLPIVLLYTLWSYYK 360

Query: 319 FRGKV 323
             G++
Sbjct: 361 MWGRM 365