Pairwise Alignments

Query, 1045 a.a., Multidrug efflux pump subunit AcrB from Paraburkholderia bryophila 376MFSha3.1

Subject, 1021 a.a., ACR family transporter from Pseudomonas simiae WCS417

 Score =  751 bits (1940), Expect = 0.0
 Identities = 408/1015 (40%), Positives = 611/1015 (60%), Gaps = 7/1015 (0%)

Query: 3    EGRFNLSALAVRERSITLFLICLISLAGLLSFFKLGRAEDPAFTIKVMTIVSVWPGATAQ 62
            +G FNLS  A++ +S   +L+ +  L G+ S+  LGR EDP+FTIK M I + WPGAT +
Sbjct: 2    KGSFNLSDWALKHQSFVWYLMFVALLMGVFSYMNLGREEDPSFTIKTMVIQTRWPGATQE 61

Query: 63   EMHDQVAEKIEKRMQELRWYDRTETYTRPGLAFTTLTLLDSTPPSEVQEEFYQARKKIGD 122
            E   QV ++IEK+++EL   D  ++YTRPG +   + L D+T    + E +YQ RKKI D
Sbjct: 62   ETLKQVTDRIEKKLEELDALDYVKSYTRPGESTVFVFLKDTTSAKAIPEIWYQVRKKIDD 121

Query: 123  EAANLPAGVIGPMVNDEYADVTFALFALKARGEPQRLLVRDGETLRQRLLHVPGVKKVNI 182
                 P G+ GP  NDE+ DV  +++A    G   R L    E +R  +  VPG+ KV +
Sbjct: 122  IRGTFPQGLQGPSFNDEFGDVFGSVYAFTGDGLSMRQLRDYVEQVRAEIRSVPGLGKVEM 181

Query: 183  IGEQAERIYVQFSHDRLATLGVSPQDVFAALNGQNALTPAGSVETKGPEVFIRLDGAFDN 242
            IG+Q E IY+ FS  +LA LG+  + V  +L  QNA+TPAG +E     + +R  G F +
Sbjct: 182  IGQQDEVIYLNFSTRKLAALGIDQRQVVQSLQSQNAVTPAGVIEAGPERISVRTSGQFAS 241

Query: 243  LQKIRDTPVVVQGRTLKLSDIATVERGYEDPATFLIRNNGEPALLLGIVMRDGWNGLDLG 302
             + + +  + +  R  +L+DIA + RGY DPA  + R NG+PA+ L I M+ G N    G
Sbjct: 242  EKDLANVNLRLNDRFYRLADIADISRGYVDPARPMFRFNGKPAIGLAIAMQKGGNIQSFG 301

Query: 303  KALDSEVGAINGGLPLGMSLTKVTDQAVNIHSAVDEFMLKFFVALLVVMFVSFVSMGWRA 362
            KAL   +  +   LP+G+ + KV+DQA  +  AV  F    F A+++V+ VSF+S+G RA
Sbjct: 302  KALHERMDELTADLPVGVGVHKVSDQAEVVEEAVGGFTSALFEAVIIVLVVSFISLGMRA 361

Query: 363  GLVVAAAVPLTLAVVFVVMAATGKNFDRITLGSLILALGLLVDDAIIAIEMMVVKMEEGY 422
            GLVVA ++PL LA+VFV M  +G    R++LG+LI+ALGLLVDDA+I +EMM+ ++E+G 
Sbjct: 362  GLVVACSIPLVLALVFVFMEYSGITMQRVSLGALIIALGLLVDDAMITVEMMITRLEKGE 421

Query: 423  SRVAASAYAWSHTAAPMLSGTLVTAVGFMPNGFARSTAGEYTSNMFWIVGIALIASWVVA 482
            ++  A+ YA++ TA PML+GTLVT  GF+P G   S+AGEYT  +F ++ +A++ SWVVA
Sbjct: 422  TKEQAATYAYTSTAFPMLTGTLVTVAGFVPIGLNASSAGEYTFTLFAVIAVAMLVSWVVA 481

Query: 483  VVFTPYLGVKMLPDFKKVDGGHDAIYDTPRYNR-FRQVLTRVIARKWLVAGSVVALFALA 541
            V+F P +GV +L    K    H+A  +  R  R F   +   +  +W   G  VALF  +
Sbjct: 482  VLFAPVIGVHILSANVK---PHNA--EPGRIGRAFNGGMLWAMRNRWWAIGITVALFVAS 536

Query: 542  ILGMGVVKKQFFPISDRPEVLVEVQMPYGTSISQTSAASQKVEAWLSGQKEARIVTAYVG 601
            +  M  V+ QFFP SDRPE+LV++ +P   SI++T  A  ++EA +    +    + Y+G
Sbjct: 537  VFSMQFVQNQFFPSSDRPELLVDLNLPQNASINETRKAVDRLEAIIKDDPDIARWSTYIG 596

Query: 602  QGAPRFFLAMGPELPDPSFAKIVIRTDSQEERDALKARLRRAIADGLVPEARVRVTQLVF 661
            QGA RF+L +  +L +P +A++VI +   EER  L ARL++ + D  V      V  L  
Sbjct: 597  QGAIRFYLPLDQQLENPYYAQLVIVSKGLEERGELIARLQKRLRDDFVGIGSY-VQPLEM 655

Query: 662  GPYSPFPVAYRVTGPDPDKLRGIAAEVERVMQASPMMRTVNTDWGTRSPALHFVLQQDRL 721
            GP    P+ YRV+G D D++R  A E+  ++  +  +  +  DW      L   + QD+ 
Sbjct: 656  GPPVGRPIQYRVSGKDTDQVRKHAIELATLLDKNSHLGEIIYDWNEPGKVLRIDIAQDKA 715

Query: 722  QAVGLTSSAVAQQLQFLLTGTPVTAVREDIRTVQVIARSAGDVRLDPARLGDFTLAGATG 781
            + +GL+S  VAQ +  +++G  VT V +DI  + V+ R+    R  P  L +  +    G
Sbjct: 716  RQLGLSSEDVAQLMNSVVSGASVTQVHDDIYLINVVGRAEDAERGTPETLQNLQIVTPNG 775

Query: 782  QRIPLSQVGKVDVRMEEPISRWRDRVPTITVRGDIADNLQPPDVSTAITTQLQPIIAKLP 841
              IPL     V   +E+P+   RDR PTIT++  + D +QP D+   +  ++    A LP
Sbjct: 776  TSIPLLAFATVRYELEQPLVWRRDRNPTITIKASVRDEMQPTDLVKQLKPEIDKFSAGLP 835

Query: 842  SGYRIEQAGSIEESAKATTAMLPLFPIMLAITLVIIIFQVRSISAMVMVFMTSPLGLIGV 901
             GY++   G++EES KA   +  + P+ML +    ++ Q+ S+  M +V   +PLGLIGV
Sbjct: 836  VGYKVATGGTVEESGKAQGPIAKVVPLMLFLMATFLMIQLHSVQKMFLVASVAPLGLIGV 895

Query: 902  VPTLILFGQPFGINALVGLIALSGILMRNTLILIGQIHQNENAGLDPFNAVVEATVQRAR 961
            V  LI  G P G  A++G++AL GI++RN++IL+ QIH+ E AG  P++AVVEAT  R R
Sbjct: 896  VLALIPTGTPMGFVAILGILALIGIIIRNSVILVTQIHEYEVAGYTPWDAVVEATEHRRR 955

Query: 962  PVILTAMAAILAFIPLTHSVFWGTLAYTLIGGTFAGTILTLVFLPAMFAIWFKIR 1016
            P++LTA AA L  IP+   VFWG +AY +IGG    T+LTL+FLPA++  W+KIR
Sbjct: 956  PILLTAAAASLGMIPIAREVFWGPMAYAMIGGIIIATLLTLLFLPALYVAWYKIR 1010