Pairwise Alignments

Query, 451 a.a., lipopolysaccharide transport system ATP-binding protein from Paraburkholderia bryophila 376MFSha3.1

Subject, 454 a.a., ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  306 bits (785), Expect = 7e-88
 Identities = 177/425 (41%), Positives = 236/425 (55%), Gaps = 27/425 (6%)

Query: 5   DIAIGVHQLAKRYQIYDTPRDRLKQFVLPRAQTLFGAKPKHYFSEFWALNDVSFEVKKGE 64
           DIAI V+ ++K + IYD PRDR  Q        +F  + K YF EFWAL D+SF V+KGE
Sbjct: 4   DIAIKVNAVSKCFHIYDNPRDRFLQ--------MFNGRRKQYFREFWALRDISFVVRKGE 55

Query: 65  TVGIIGRNGSGKSTLLQMICGTLSPTQGHVEVNGRVAALLELGAGFNPDFTGRENIFMNG 124
           TVGIIGRNGSGKSTLLQ+ICGTL+PT G V+ +GRVAALLELG+GFNPDF+GREN++MN 
Sbjct: 56  TVGIIGRNGSGKSTLLQIICGTLTPTAGDVQTSGRVAALLELGSGFNPDFSGRENVYMNA 115

Query: 125 TLLGLSKQEIEARYDDIVAFADVGMFIDQPVKMYSSGMYVRVAFAIAASMDPSILIVDEA 184
            +LGLS++E +AR+  I AFA++G FIDQPVK YSSGM VR+AFA+A ++DP ILIVDEA
Sbjct: 116 AVLGLSREETDARFSQIEAFAEIGNFIDQPVKSYSSGMMVRLAFAVAINVDPQILIVDEA 175

Query: 185 LAVGDLAFQAKCMVRLRELMDRGTTVLFVSHDMSSVRNICSKVLWLKQGRAVAYGDPKQV 244
           L+VGD  FQ KC  R+  +   G T+LFVSH  S+V  +C + + L  G  +  G PK V
Sbjct: 176 LSVGDELFQRKCFARIEAIKANGATILFVSHSGSAVVELCDRAILLDNGDKLTEGAPKNV 235

Query: 245 VGAYVSEMNLEINRISGGHQVEPAPEQ-----------ADAEPAPEVVPQQSVSFLDGHT 293
           +G Y   +     ++ G      A              A+A  + +        F D H 
Sbjct: 236 IGKYQKLLYAPAEKVEGIRAAVSAEGDVSLSTLNSIAGANAHASSKNTTDDVEEFYDPHL 295

Query: 294 R------YGDGRATILNVTIMNGQGKPTELLELHEAYTLRVIVKANVDIERPVVGYSARD 347
           +      Y    A I    I+N  G+P   L     Y        +V       G   + 
Sbjct: 296 KSQSELAYESHGAVINLPQIVNLAGEPVNCLARGRTYRYTYKTDFSVAATGVRFGMMIKT 355

Query: 348 FKGNQVVGAMNSNFPDVDMPSFEAGKVYCIDITGTNTLTQGGYTVNVGIENMV--QPNKI 405
             G ++ GA  +  P   +     G +  ++      L  G Y VN G+   V  +   +
Sbjct: 356 LAGVELGGAATATSPQDAVSYVSPGTIIQVEFAFECNLNPGTYFVNAGVLGSVNGEETYL 415

Query: 406 HQYLD 410
           H+ LD
Sbjct: 416 HRLLD 420