Pairwise Alignments

Query, 316 a.a., protein translocase subunit secF from Paraburkholderia bryophila 376MFSha3.1

Subject, 857 a.a., protein-export membrane protein SECD from Agrobacterium fabrum C58

 Score =  213 bits (542), Expect = 1e-59
 Identities = 116/309 (37%), Positives = 193/309 (62%), Gaps = 5/309 (1%)

Query: 8   KDIPFMQRALIFNAISLLTFLAAVFFLVHRGLHLSVEFTGGTVIEVQYP-GAAPLDPVRG 66
           +DIPFM+   +   I+ +  LA V   V +GL+L ++F GG+VIEV+   G A L  +R 
Sbjct: 545 RDIPFMRYRRVVFMITGVIMLACVGGFVAKGLNLGIDFQGGSVIEVRAKQGEADLADIRE 604

Query: 67  TLSKLGYADAQVQNFGTSRDVLIRLPLKQGLTSAQQSDQVMSALKTETPQVQLQRVEFVG 126
            L++L   + Q QNFG+ +DVLIR+  + G  +A+QS   +   + E  +   +RVE VG
Sbjct: 605 RLNQLNLGEIQAQNFGSPQDVLIRIQAQDGGENAEQSAITLVRGELED-KYDFRRVEVVG 663

Query: 127 PQVGKELATDGLLALACVVAGIVIYLSFRFEWKYAVAGVIANLHDVVIILGFFAFFQWEF 186
           P V  +L     + +   +A I++Y+  RFEW++A+  VI+ +HDVV  +G F F   EF
Sbjct: 664 PAVSGDLTVTSTIGVLLAMAAIMVYIWVRFEWQFALGAVISMVHDVVFTIGLFVFLGIEF 723

Query: 187 SLSVLAAVLAVLGYSVNESVVIFDRIRETFRRERKMTVIEVINHAITSTMSRTVITHGCT 246
           +L+ +AA+L ++GYS+N++VVI+DR+RE  RR +KM +  +I+ ++  T+SRT++T    
Sbjct: 724 NLTSIAAILTIIGYSLNDTVVIYDRVRENLRRYKKMPLSMIIDVSLNQTLSRTILTGLTV 783

Query: 247 QMMVLSMFLFGGPTLHYFALALTVGILFGIYSSVFVAAALAMWFGVKRDDLIKDKKD-RV 305
            + +L+++LFGG  +  F  A+  G+  G++SSV++AA + + F ++ D   KD +D + 
Sbjct: 784 LLALLALYLFGGEVIRSFTFAMLFGVGIGVFSSVYIAAPVLIAFKLRPDS--KDAEDEKD 841

Query: 306 DPNDPNAGA 314
           D  + N GA
Sbjct: 842 DKKENNTGA 850



 Score = 67.8 bits (164), Expect = 9e-16
 Identities = 54/197 (27%), Positives = 100/197 (50%), Gaps = 11/197 (5%)

Query: 96  GLTSAQQSDQVMSALKTETPQVQLQRVE--FVGPQVGKELATDGLLALACVVAGIVIYLS 153
           G  S Q ++ +   L+       L  VE   VGP +G +  T GL A A    G++I++ 
Sbjct: 331 GSFSVQGANDLAVLLRAGALPATLTVVEERTVGPSLGNDSITAGLTASAIGAVGVLIFM- 389

Query: 154 FRFEWKYAVAGVIANLHDVVIILGFFAFFQWEFSLSVLAAVLAVLGYSVNESVVIFDRIR 213
           F F   + +   IA + +VV+++   +      +L  +A ++  +G +V+ +V+I++RIR
Sbjct: 390 FVFYGFFGLLANIALIVNVVMLIAVLSVIGSTLTLPGIAGIVLTIGMAVDSNVLIYERIR 449

Query: 214 ETFRRERKMTVIEVINHAITSTMSRTVITHGCTQMMVLS-MFLFGGPTLHYFALALTVGI 272
           E  +  + +  I+ +++  T   + T+I    T ++V S +F  G   +  FA+ L VGI
Sbjct: 450 EEVKSGKPL--IQALDNGFTRAFA-TIIDANLTTLIVASVLFYMGTGPVKGFAVTLAVGI 506

Query: 273 LFGIYSSVFVAAALAMW 289
           +    ++VF A  L  W
Sbjct: 507 I----TTVFTAYTLTAW 519