Pairwise Alignments

Query, 187 a.a., RNA polymerase, sigma-24 subunit, RpoE from Paraburkholderia bryophila 376MFSha3.1

Subject, 190 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

 Score = 44.3 bits (103), Expect = 1e-09
 Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 16/123 (13%)

Query: 58  LFQRILQNAMHDHFRRAKVRNTWVSLFSSLGNADDDEFDPLETFEAQQGSAGAESNEQKL 117
           LFQ I +N + DH+R+  + N              D +D  E   AQ   +     +  L
Sbjct: 78  LFQ-IARNRLIDHWRKHGIHNPL-----------HDSYD--EQLHAQADDSAGPEQQLSL 123

Query: 118 EREQVLQMIDDEIRKLPARQREAFLMRYWEDMDVAETAAAMGCSEGSVKTHCSRATHTLA 177
            R+Q    +D  ++ LP  QRE FL+R   D++V + AA  G    +VK+    A   L 
Sbjct: 124 SRDQA--RLDAALQGLPEDQREVFLLRLHGDLEVPQIAALTGTPLETVKSRLRYAQQKLR 181

Query: 178 QAL 180
           + L
Sbjct: 182 RLL 184