Pairwise Alignments

Query, 787 a.a., ATP-dependent DNA helicase UvrD from Paraburkholderia bryophila 376MFSha3.1

Subject, 806 a.a., ATP-dependent DNA helicase UvrD/PcrA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  949 bits (2452), Expect = 0.0
 Identities = 504/804 (62%), Positives = 600/804 (74%), Gaps = 32/804 (3%)

Query: 4   LLANLNPEQHAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQHGLASPATILAVTFTNK 63
           LLA LN EQ AAV LP E ALILAGAGSGKTRVL TRIAWL+Q G  SP  ILAVTFTNK
Sbjct: 14  LLAGLNAEQSAAVLLPAEHALILAGAGSGKTRVLTTRIAWLLQSGQVSPGGILAVTFTNK 73

Query: 64  AAREMMSRLSALLPIDTRGMWIGTFHGLCNRMLRAHHRDAGLPATFQILDTADQLSAIKR 123
           AA+EMM+RLSA+LPI+ RGMWIGTFHGLCNR LRAHH+ A LPATFQILDT DQLSAIKR
Sbjct: 74  AAKEMMTRLSAMLPINVRGMWIGTFHGLCNRFLRAHHKLANLPATFQILDTQDQLSAIKR 133

Query: 124 LMKGLNIDDEKYPAKNLQYFINNAKEQGLRPKDVDATDNFNRKFVELYEAYDQQCQREGV 183
           L K  N+DDE+YP K +QYFI+  KE G RP DV A D   RK +ELY  Y++QCQREGV
Sbjct: 134 LCKQFNVDDERYPPKQIQYFISGCKEDGQRPHDVPARDEETRKKLELYALYEEQCQREGV 193

Query: 184 VDFPELLLRCYELLAHNPPLRAHYQARFKHILVDEFQDTNKLQYAWLKL-----LAGQT- 237
           VDF EL+LR YE+L  N P+R HYQ RF+HIL+DEFQDTN+LQYAW+K+     L G T 
Sbjct: 194 VDFGELMLRSYEVLRDNDPVREHYQRRFRHILIDEFQDTNRLQYAWIKMFSAPPLEGLTP 253

Query: 238 --NSIFAVGDDDQSIYAFRGANVGNMRDFEHEFNVRHLIKLEQNYRSHGHILDAANQLIA 295
             N++FAVGDDDQSIYAFRGA VGNM DF  EF VRH IKLEQNYRS  +ILD+ANQLI+
Sbjct: 254 SGNAVFAVGDDDQSIYAFRGARVGNMADFVREFGVRHQIKLEQNYRSVSNILDSANQLIS 313

Query: 296 NNSRRLGKNLRTDAGHGEPVRVYESATDSQEAGWIVEEIKALISTGTSRSEIAILYRSNA 355
           +N+ RLGKNLRTDAG GEPVRV+E+ +D  EA W+V+E+K L   G  RSE+A+LYRSNA
Sbjct: 314 HNTHRLGKNLRTDAGAGEPVRVFEATSDFAEAQWMVDEMKQLAREGIPRSEMAVLYRSNA 373

Query: 356 QSRTIEHTLVNAGIAYRVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFARVVNFPTRGI 415
           QSR +E  L NA + YRVYGGLRFFER E+KHALAYLRL++N +DDT+F RVVNFP RGI
Sbjct: 374 QSRVVETALFNAALPYRVYGGLRFFERAEIKHALAYLRLLENAHDDTSFLRVVNFPPRGI 433

Query: 416 GARSIEQLADAARLYNCSMAAAIPYVAGKAGSSLASFANLIGKMRAETQQMSLPETVEYV 475
           GARSIEQL D AR   CS+  A+  V G+AG ++ +FA  I  MR +T+  +L E +E V
Sbjct: 434 GARSIEQLQDVARTSGCSLHDAVSAVTGRAGVAVGNFAAKIDVMREQTEGRTLREIIELV 493

Query: 476 VRASGLADFYQNEREGQDRLENLQELVNAAAAFVSEEGYGMDTPARSIPLRPGATAAPEL 535
           +  SGL + Y+ EREGQDR+ENL+ELVNAA +FVS EG+G D  A ++P+        + 
Sbjct: 494 LAHSGLIEHYRGEREGQDRVENLEELVNAAESFVSIEGFGRD--AVALPVDELGKPLTQS 551

Query: 536 AVATD-DPNTVVLDAPGIADPAQNPDTMTPLAGFLSHASLEAGDNQAQAGQEAVQLMTVH 594
            V+   DPN  V+D P +A  A+  +T++PLA FL+HA+LE+GDNQAQAGQ+AVQLMTVH
Sbjct: 552 PVSQGLDPNLPVVDEP-LAPDAETGETLSPLAAFLTHAALESGDNQAQAGQDAVQLMTVH 610

Query: 595 AAKGLEFTAVFITGLEEGLFPHENSAMESDGLEEERRLMYVAITRAKERLYLSFAQSRML 654
           AAKGLEF  VFITG+EEGLFPHENS  + DGLEEERRLMYVAITRA++RLYLS +Q+RML
Sbjct: 611 AAKGLEFDCVFITGMEEGLFPHENSMSDRDGLEEERRLMYVAITRARKRLYLSHSQTRML 670

Query: 655 HGQTRYNIRSRFFDELPQETLKWLTPKVEAGARWGGRSDNAGYGRDWFARPDRQQGYGGG 714
           HGQTRYN++SRFFDELP+E LKWLTP   A   W   +   G G  W    + ++G+GG 
Sbjct: 671 HGQTRYNMKSRFFDELPEECLKWLTPPQPA---WS--APMGGGGGQW---QNGRRGFGGA 722

Query: 715 -ASTAAAPLPAFANE-------QRAAE----AGFRVGQQVFHTKFGEGTITALEGGGADA 762
            A+   +  P F          Q A E       R G  VFH KFGEG + A+EG G DA
Sbjct: 723 PAALQPSWSPGFKERGDPKGLGQTAPEPDRGTEIRAGLAVFHNKFGEGKVLAVEGAGDDA 782

Query: 763 KAQVKFKRHGEKWLALAVAKLQAV 786
           +AQV F RHG KWLAL+VAKL  +
Sbjct: 783 RAQVNFTRHGTKWLALSVAKLTPI 806