Pairwise Alignments

Query, 787 a.a., ATP-dependent DNA helicase UvrD from Paraburkholderia bryophila 376MFSha3.1

Subject, 720 a.a., DNA-dependent ATPase I and helicase II from Escherichia coli BL21

 Score =  636 bits (1640), Expect = 0.0
 Identities = 354/792 (44%), Positives = 477/792 (60%), Gaps = 86/792 (10%)

Query: 4   LLANLNPEQHAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQHGLASPATILAVTFTNK 63
           LL +LN +Q  AV  P    L+LAGAGSGKTRVL+ RIAWL+     SP +I+AVTFTNK
Sbjct: 6   LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65

Query: 64  AAREMMSRLSALLPIDTRGMWIGTFHGLCNRMLRAHHRDAGLPATFQILDTADQLSAIKR 123
           AA EM  R+  L+     GMW+GTFHGL +R+LRAHH DA LP  FQILD+ DQL  +KR
Sbjct: 66  AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125

Query: 124 LMKGLNIDDEKYPAKNLQYFINNAKEQGLRPKDVDATDN-FNRKFVELYEAYDQQCQREG 182
           L+K +N+D++++P +   ++IN+ K++GLRP  + +  N   + + ++Y+AY + C R G
Sbjct: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAG 185

Query: 183 VVDFPELLLRCYELLAHNPPLRAHYQARFKHILVDEFQDTNKLQYAWLKLLAGQTNSIFA 242
           +VDF ELLLR +EL  + P +  HY+ RF +ILVDEFQDTN +QYAW++LLAG T  +  
Sbjct: 186 LVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMI 245

Query: 243 VGDDDQSIYAFRGANVGNMRDFEHEFNVRHLIKLEQNYRSHGHILDAANQLIANNSRRLG 302
           VGDDDQSIY +RGA V N++ F ++F     I+LEQNYRS  +IL AAN LI NN+ RLG
Sbjct: 246 VGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLG 305

Query: 303 KNLRTDAGHGEPVRVYESATDSQEAGWIVEEIKALISTGTSRSEIAILYRSNAQSRTIEH 362
           K L TD   GEP+ +Y +  +  EA ++V  IK     G + +E AILYRSNAQSR +E 
Sbjct: 306 KKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEE 365

Query: 363 TLVNAGIAYRVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFARVVNFPTRGIGARSIEQ 422
            L+ A + YR+YGG+RFFERQE+K AL+YLRLI N NDD AF RVVN PTRGIG R+++ 
Sbjct: 366 ALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDV 425

Query: 423 LADAAR------LYNCSMAAAIPYVAGKAGSSLASFANLIGKMRAETQQMSLPETVEYVV 476
           +   +R         C        +AG+A S+L  F  LI  +  ET  M L    + V+
Sbjct: 426 VRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVI 485

Query: 477 RASGLADFYQNER--EGQDRLENLQELVNAAAAFVSEEGYGMDTPARSIPLRPGATAAPE 534
           + SGL   Y+ E+  +GQ R+ENL+ELV A   F   E                      
Sbjct: 486 KDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNE---------------------- 523

Query: 535 LAVATDDPNTVVLDAPGIADPAQNPDTMTPLAGFLSHASLEAGDNQAQAGQEAVQLMTVH 594
                                    + + PL  FLSHA+LEAG+ QA   Q+AVQLMT+H
Sbjct: 524 -----------------------EDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLH 560

Query: 595 AAKGLEFTAVFITGLEEGLFPHENSAMESDGLEEERRLMYVAITRAKERLYLSFAQSRML 654
           +AKGLEF  VFI G+EEG+FP + S  E   LEEERRL YV +TRA ++L L++A++R L
Sbjct: 561 SAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRL 620

Query: 655 HGQTRYNIRSRFFDELPQETLKWLTPKVEAGARWGGRSDNAGYGRDWFARPDRQQGYGGG 714
           +G+  Y+  SRF  ELP+E ++ +  +                     +RP   Q  G  
Sbjct: 621 YGKEVYHRPSRFIGELPEECVEEVRLRATV------------------SRPVSHQRMG-- 660

Query: 715 ASTAAAPLPAFANEQRAAEAGFRVGQQVFHTKFGEGTITALEGGGADAKAQVKFKRHGEK 774
                   P   N     ++G+++GQ+V H KFGEGTI  +EG G  ++ QV F+  G K
Sbjct: 661 -------TPMVEN-----DSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIK 708

Query: 775 WLALAVAKLQAV 786
           WL  A A+L+ V
Sbjct: 709 WLVAAYARLETV 720