Pairwise Alignments

Query, 787 a.a., ATP-dependent DNA helicase UvrD from Paraburkholderia bryophila 376MFSha3.1

Subject, 824 a.a., DNA helicase II from Agrobacterium fabrum C58

 Score =  456 bits (1173), Expect = e-132
 Identities = 309/820 (37%), Positives = 419/820 (51%), Gaps = 104/820 (12%)

Query: 3   DLLANLNPEQHAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQHGLASPATILAVTFTN 62
           D L+ LNPEQ  AV   + P L+LAGAG+GKTRVL TRIA ++  G A P+ ILAVTFTN
Sbjct: 51  DYLSGLNPEQREAVETLDGPVLVLAGAGTGKTRVLTTRIAHILATGRAYPSQILAVTFTN 110

Query: 63  KAAREMMSRLSALLPIDTRGM-WIGTFHGLCNRMLRAHHRDAGLPATFQILDTADQLSAI 121
           KAAREM  R+  L+     GM W+GTFH +  ++LR H    GL + F ILDT D +  I
Sbjct: 111 KAAREMKERIGVLVGGAVEGMPWLGTFHSIGVKLLRRHAELIGLKSDFTILDTDDVVRLI 170

Query: 122 KRLMKGLNIDDEKYPAKNLQYFINNAKEQGLRPKDVDATDN---FNRKFVELYEAYDQQC 178
           K+L++   +DD+++PAK     I+  K +GL P D+   D+    N K  ELY AY  + 
Sbjct: 171 KQLIQAEGLDDKRWPAKQFAGMIDGWKNKGLTPPDIPEGDSRAFANGKGRELYAAYQARL 230

Query: 179 QREGVVDFPELLLRCYELLAHNPPLRAHYQARFKHILVDEFQDTNKLQYAWLKLLA---- 234
           +     DF +LLL    +   +  +   Y  +F++ILVDE+QDTN  QY WL+LLA    
Sbjct: 231 KTLNACDFGDLLLHPISIFRRHTDILKEYHQKFRYILVDEYQDTNTAQYMWLRLLAQRAK 290

Query: 235 GQTNSIFAVGDDDQSIYAFRGANVGNMRDFEHEFNVRHLIKLEQNYRSHGHILDAANQLI 294
            +  ++  VGDDDQSIY +RGA V N+  F+ +F    +IKLE+NYRS  HIL AA  LI
Sbjct: 291 DEPQNVCCVGDDDQSIYGWRGAEVDNILRFDKDFPGAKVIKLERNYRSTEHILGAAGHLI 350

Query: 295 ANNSRRLGKNLRTDAGH--GEPVRVYESATDSQEAGWIVEEIKALISTGTSRSEIAILYR 352
           A+N  RLGK L T+      E V V+ +    +EA  + EEI+ L       +++AIL R
Sbjct: 351 AHNEGRLGKTLFTERSSPDDEKVVVHAAWDSEEEARAVGEEIEQLQRKNYKLNDMAILVR 410

Query: 353 SNAQSRTIEHTLVNAGIAYRVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFARVVNFPT 412
           ++ Q R  E   V  G+ YRV GG RF+ER E++ A+AY RL+  P DD AF R+VN P 
Sbjct: 411 ASFQMREFEDRFVTLGLNYRVIGGPRFYERLEIRDAMAYFRLVCQPADDLAFERIVNTPK 470

Query: 413 RGIGARSIEQLADAARLYNCSMAAAIPYVAGKAGSSLASFANLIGKMRAETQQMSLPETV 472
           RG+G  +I  L D AR  +  M              LA+ A++I             ET 
Sbjct: 471 RGLGDTTIRNLHDYARARDIPM--------------LAAAADII-------------ETD 503

Query: 473 EYVVRA-SGLADFYQNEREGQDRLENLQELVNAAAAFVSEEGYGMDTPARSIPLRPGATA 531
           E   +A   L D  Q+ R  Q  LEN +     A   + E GY     A      PG   
Sbjct: 504 ELKPKARKALFDVVQDFRRWQGLLENTEH-TTLAEQILDESGYTAMWQADKTAEAPGRLE 562

Query: 532 APELAVATDDPNTVVLDAPGIADPAQNPDTMTPLAGFLSHASLEAGDNQAQAGQEAVQLM 591
                               + +  ++ ++   + GFL H +L   D +  A  +AV +M
Sbjct: 563 -------------------NLKELIRSMESFESMRGFLEHVALVM-DAEQNAELDAVSIM 602

Query: 592 TVHAAKGLEFTAVFITGLEEGLFPHENSAMES--DGLEEERRLMYVAITRAKERLYLSFA 649
           T+H+AKGLEF  VF+ G EEGLFPH+ +  E    GLEEERRL YV ITRAK+  ++ F 
Sbjct: 603 TLHSAKGLEFDTVFLPGWEEGLFPHQRALDEGGRSGLEEERRLAYVGITRAKKLCHIWFV 662

Query: 650 QSRMLHGQTRYNIRSRFFDELPQETLKWLTPKVEAGARWGGRSDNAGYGRDWFARPD--- 706
            +R +HG  +  + SRF DELP   +        + + +GG     GYG+  F + D   
Sbjct: 663 SNRRIHGLWQSTLPSRFLDELPPAHV----DVAASDSNYGGYGGRGGYGQSRFDKADPFT 718

Query: 707 -------------------------------RQQGYG-GGASTAAAPLPAFANEQRAAEA 734
                                           + GYG  G  T        A       +
Sbjct: 719 NNYSTPGWKRAQQNRSDATRDNWGTRSGHAVERIGYGESGPRTRTIDGELVAKSVADKPS 778

Query: 735 GFRVGQQVFHTKFGEGTITALEGGGADAKAQVKFKRHGEK 774
            F VG +VFH KFG G I+A+EG     K  + F R GEK
Sbjct: 779 KFFVGDRVFHLKFGNGNISAIEGN----KLTINFDRAGEK 814